Lichenicola cladoniae: HN018_18180
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Entry
HN018_18180 CDS
T07054
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
lck
Lichenicola cladoniae
Pathway
lck02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HN018_18180 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_18180 (rhaS)
Transporters [BR:
lck02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
HN018_18180 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
SeleniumBinding
Motif
Other DBs
NCBI-ProteinID:
QKE91701
UniProt:
A0A6M8HU24
LinkDB
All DBs
Position
complement(4020843..4021838)
Genome browser
AA seq
331 aa
AA seq
DB search
MYRRTLLAGLGAATAVSGAGLWRPAVAAAPLRIAIVAKSLGIGFFNAVHVGGDEAAKSIG
GIEVIFTGPTNTAAENQIDVINALIAQHVDAIAISANDPDALVPACKRALQRGIKVVTYD
STVADGRLLYLADATDEQVGITCNKLASDACGGKGKVAIVSATVTSTNQNAWIAAMKKAL
PQTPGLDLIATVYGDDLSDKSYREATALLQKYPDLAVIIAPSTVGITASAKAVEDAGKTG
KVFVTGLGLPSECAGAVAKGTIKSFAIWNPVDIGYAVVEISHALIKGTGAAGQSIDAGRL
GKIAFDAQGNGTLGVPTIYDKSNIDAAAKLF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaagaaccctgcttgccggcctcggtgcagccaccgccgtctcgggtgccggc
ctatggcggccggccgtcgcggcggcacccttgcggattgccatcgttgcgaagtcgctg
ggaatcggcttcttcaatgccgtgcatgtcggtggcgacgaggctgcgaaatccatcggc
ggcatcgaggtcatcttcaccggcccgacaaacaccgcggccgagaaccagatcgacgtg
atcaacgcgctgatcgcgcagcatgtcgatgcgatcgcgatttcagccaacgatccggac
gcgctggtaccggcctgcaagcgggctctgcaacgcgggatcaaggtggtcacgtacgac
tcgaccgttgcggacggaaggttgctgtatcttgccgacgcgaccgacgaacaggtcggc
atcacctgcaacaagcttgcgtccgatgcctgtggcggcaagggcaaggtggcgatcgta
tcggccaccgtgacgtcgacgaaccagaacgcatggatcgcggcgatgaagaaggcgctg
ccgcagacccccggcctcgatctcatcgccacggtctacggcgacgacctctcggacaaa
tcctatcgcgaggcgacggcgctgctgcagaaatacccggacctcgcggtcatcatcgcc
ccgtcgaccgtcgggatcaccgccagcgccaaggcggtcgaggatgccggcaagaccgga
aaggtgttcgtgactggtctcgggcttccgagcgaatgcgccggtgccgtggcgaaggga
acgatcaagagcttcgccatctggaacccggtcgatatcggctatgcggtggtcgagata
tcgcatgccctgatcaagggaacgggcgcggccggacagtcgatcgatgcaggccgtctc
ggcaagatcgcgttcgatgcacaggggaacggcaccctcggtgtgcccacgatctacgac
aagagcaacatcgacgctgccgccaagctgttctga
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