Lichenicola cladoniae: HN018_20685
Help
Entry
HN018_20685 CDS
T07054
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lck02000
]
HN018_20685
Transporters [BR:
lck02000
]
Other transporters
Pores ion channels [TC:
1
]
HN018_20685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QKE92129
UniProt:
A0A6M8HUC3
LinkDB
All DBs
Position
complement(4560755..4563724)
Genome browser
AA seq
989 aa
AA seq
DB search
MSAFVGFRNLLLLSTAGCIALGIATPALAQAPVVPGKQAIDSTTAGTTSATSALKQDAAP
TKDAAETVTVTGSILRNPNLSGASPVTHLTAKDMQVRGITTVAAALSQVSSNNGGSLPAA
FSGNGAFAIGASGASLRGLTVDSTLVLIDGQRAAYYPLADDGQRNFVDLNTIPQSIVQTI
DVQQDSASATYGADAVAGVVNIITRKQIEGFEGGAEGGLSQRADGGHQRLYATYGVGDLN
RDGYNVYLNGEYQNDDIIYNRDRGYPYDTGDLRGLSGSNGNENGIQNDGTISGIGSTRVA
QVRPVNADGSTGLLQPISPTLGCNGLATHVVAQGTVCEQNTVGDYRLLFPSDRRISVNLR
GTANLSDRAQAYAMFSYAQNQVFTTGSVSGPSSIRQKSASGDADLTDIVLPVNLANGTLN
PNNPFAAQGLPAQIYYRFADLNTTNLVLNQTYRGSTGLNGSIDSGWGGDWMYNASFVGMV
DTLQRTVTGVPTFAGILNAVNTGSYNFVDPSKNSAAVRNAIAPKSVQNDSSQEYSLDVTL
SKGLFSLPGGMVTLGIGGNARYESVNDPTPNPDDPSNPNAQYLSQLRSFGAVGSRRVGSG
YFEADIPFIKQINVNVSGRYDNYSEGFSNFAPKIGVILRPIDKVMFRGTFSKGFRVPSFP
ETNAVPGVGYISYTPTDAAFLAQHQNSSGTGPDTYASTYNLGLNSVGNPALKPEKSTSFT
GGTVLTPLPWLNVTADYYHIKKINFITTADYSGPVANYFTNKEYPSGISVTPDVADPDHP
EATILRPGIVNLGYINAAKLVTSGIDLALGARIPLPRPLQDIKWTSTGQATYILGYTITY
PGTGLQSYAGSLGPANISSASGTPRWRANWANTFTYKRLAVTATMNYTSGYKLTAEDVTG
GGTLNDCSMAQQGFSGDPLRCGVASFVDVDLTINYALTNRLNLYTNIYNVFDKGPPLDTG
TYGGYQYNPAWATAGILGRAFRFGVTGKF
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctttcgttggctttcgaaaccttctcctgctgtccaccgccgggtgcattgcg
cttggcatcgccacgccggcgctcgcccaggcccctgttgtccccggcaagcaggcgatc
gacagcaccacggccggcacgacatcggctacgtccgcgctgaaacaggacgcggcaccg
accaaggacgccgccgagactgtcaccgtcaccggctccatcctgcgcaacccgaacttg
tcgggcgcttcgcccgtcacgcatctgaccgccaaggacatgcaggtccgcggcatcacc
acggtcgctgccgcgctctcgcaggtctcgtccaataacggcggcagcctgccggccgca
ttttccggcaacggtgccttcgccatcggcgcgagcggcgcctcgttgcgtggcctgacg
gtcgactcgactctggtgctgatcgacggccagcgcgccgcctattacccgctggcggat
gacggccagcgcaacttcgtcgatctcaatacgatcccgcaatcgatcgtgcagaccatc
gacgtgcagcaggatagcgcatccgcgacctacggcgccgacgcggtggccggcgtggtc
aacatcatcacccgcaagcagatcgagggattcgagggcggcgcggaaggcggcctcagc
cagcgcgccgacggcggccatcagcgactgtatgcgacctacggcgtcggcgacctcaat
cgcgatggctacaacgtctatctgaacggcgagtaccagaacgacgacatcatctataac
cgcgaccgtggctatccctacgataccggagacctacgcggcctgtccgggtcgaacggc
aacgagaacggcatccagaacgacggcactatttcaggcatcggctcgacgcgcgtcgcc
caggtgcggccggtcaacgccgatggaagcaccggcctgctgcagccgatcagcccgacg
ctcggatgcaatggtctcgcgacacacgtggtcgcacaaggcacggtctgcgaacagaac
acggtcggcgactatcggctgctgttcccaagcgaccggcgaatcagcgttaacttgcgt
ggtactgcgaatttgagcgaccgggcgcaggcctatgcgatgttcagctatgcccagaac
caggtctttacaaccggatcggtctcgggaccgagctcgatccgccagaagagcgcgtcc
ggcgatgcggacctgacagacatcgtgctgcccgtaaaccttgccaacggcacgctcaat
ccgaacaatccgttcgcggcgcaaggcctgccggcgcagatctactaccggttcgccgat
ctcaatacgacgaacctggtcctcaaccagacctatcgcggctccaccggcctcaacggg
tcgatcgactcgggctggggcggcgactggatgtacaacgcgtcctttgtcggcatggtc
gatacgctgcagcggaccgtcaccggggtgccgaccttcgccggcatcctgaacgcggtg
aatacaggcagctataatttcgtcgatccgtcgaagaacagcgccgcggtccgcaatgcg
atcgcgccgaaatcggtgcagaacgacagcagccaggaatattcgctcgacgtcacgctc
tcgaaaggattgttcagcctgcccggtggcatggtgactttgggtattggcggcaacgca
cgttacgaatcggtcaacgacccgacccccaatccggacgatccgtccaacccgaatgcg
cagtatctgtcgcagctcaggagcttcggcgccgtcggcagccgccgggtgggatcgggc
tatttcgaggccgacatcccgttcatcaagcagatcaacgtgaacgtctccggccgctac
gacaactattcggaagggttcagcaatttcgcgcccaagatcggcgtgatcctgaggccg
atcgacaaggtcatgttccgcggcaccttctccaagggtttccgggtaccgagcttcccg
gaaaccaacgcggtgccgggagtcggttacatcagctacacaccgaccgatgccgctttc
ctggctcagcaccagaacagctccggcaccgggccggatacctatgcgtcaacctataac
ctcgggctgaacagcgtcggcaatcccgcgctgaaaccggaaaaatcgaccagcttcacc
ggcggcaccgtgctgaccccgctgccctggctgaacgtgaccgcggactattaccatatc
aagaagatcaacttcatcacgacggccgattatagcggaccggtggcgaactacttcacc
aacaaggaatacccctccggcatcagcgtgacgcccgacgttgccgatccggatcatccg
gaagccaccatcctgcgtcccgggatcgtcaatctcggctacatcaatgccgccaaactg
gtgacgtccgggatcgacctggcgctcggggcccgcatcccgctgccgcgcccgttgcag
gacatcaaatggaccagcacaggccaggcgacctacatcctcggctataccatcacatac
ccgggcaccggccttcagtcctatgccggctcgctcggaccagccaacatcagctcagct
tccggcacgccgcgctggcgcgccaactgggccaataccttcacctacaagcgcctcgcg
gtgactgcgacgatgaactacaccagcggctacaagctcaccgccgaagacgttactgga
ggcggcacgctgaatgattgcagcatggcacagcagggtttttcgggcgatccgctgcgc
tgtggcgtcgccagcttcgtggacgtcgacctgaccatcaactatgcgctgaccaacagg
ctcaacctctacaccaacatctacaacgtcttcgacaaggggccgccgctcgataccggc
acatatggcggctaccagtacaacccggcctgggccaccgccggtatcctcggccgcgcg
ttccgcttcggtgtcaccggcaagttctga
DBGET
integrated database retrieval system
