Lichenicola cladoniae: HN018_21015
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Entry
HN018_21015 CDS
T07054
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lck03009
]
HN018_21015
Enzymes [BR:
lck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HN018_21015
Ribosome biogenesis [BR:
lck03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HN018_21015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QKE92182
UniProt:
A0A6M8HUY9
LinkDB
All DBs
Position
complement(4636105..4636908)
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AA seq
267 aa
AA seq
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MTDTIPPGDDDHDDDVVVQAPDASEVEAPGRGERIAKWLARAGVASRRDAEKLLTEGKVR
MNNRVITHPATFVQPGDMVQVSGKVIDQPDRTRLWRYHKPDGLVTTHKDPEGRPTVFAAL
PPGLPRVVSVGRLDLNSEGLLLLTNDGALARQLELPSNGWIRRYRVRVFGQVDERQLAAL
ADGPVVEGVQYGPIEAGLDSQKGDNAWLTIALREGRNREIRRVMISLGFHVSRLIRTSYG
PFQLSTLAKSELEEVTGKVLREQIPKI
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacgattccgcccggcgatgacgaccatgatgacgacgtcgtcgtgcaggcg
cccgacgcttccgaggtagaggctcccggccgcggcgagcgcatcgccaagtggctggcg
cgggccggtgtcgccagccgtcgcgatgccgagaagctgctgaccgagggcaaggtcagg
atgaacaaccgggtcatcacccatccggcgaccttcgtgcagccgggcgacatggtgcag
gtgtccggcaaggtgatcgaccagccggaccgcacccggctgtggcgctaccacaagccg
gacgggctggtgacgacgcacaaggaccccgagggtcgtccgaccgtgttcgccgccctg
ccgccggggctgccgcgcgtggtgtcggtcggccggctcgacctcaacagcgaggggctg
ctgctgctgaccaacgacggcgcactggcccgccagctcgaactgccctcgaacggctgg
atccgccgctaccgggtgcgcgtgttcggccaggtggacgagcgccagctggccgccctg
gccgacggtccggtggtggaaggcgtccagtacggcccgatcgaggcggggctggacagc
cagaagggcgataatgcgtggctgacgatcgcgctgcgcgagggccgcaaccgcgagatc
cgccgcgtgatgatcagcctgggcttccatgtgagccggctgatccggacctcctacggc
ccgttccagctcagtacgctggccaagtctgagctcgaggaagtcaccggcaaggtcctg
cgcgaacagatcccgaagatctga
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