Lichenicola cladoniae: HN018_21335
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Entry
HN018_21335 CDS
T07054
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lck
Lichenicola cladoniae
Brite
KEGG Orthology (KO) [BR:
lck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lck03016
]
HN018_21335 (mnmE)
Transfer RNA biogenesis [BR:
lck03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HN018_21335 (mnmE)
Prokaryotic type
Methyltransferases
HN018_21335 (mnmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AAA_16
TniB
AAA_28
Ras
Roc
Motif
Other DBs
NCBI-ProteinID:
QKE92238
UniProt:
A0A6M8HV74
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Position
4700903..4702195
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AA seq
430 aa
AA seq
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MIDGDATIFARATGSGRAAIAVIRISGASSGHILKRLAGDVPAPRRAVVRALHASAHGGD
LLDRALVLWFPGPGSYTGEDSAELHLHAGPAVIEAVSDALVALGARPAEPGEFTRRAFSN
GRLDLLEAEGIADLIEAETQSQRRQALRQADGALSRLYHGWAERLRYLLAHQEALIDFPD
EDLPPEIEAGLVSDLGRLLDDMLAHLAQGEQAQRIRSGLVVAVVGPPNVGKSSLVNRLAG
RDAAMVSEWAGTTRDAIEVRLMLGGVPVTLVDTAGLRETLDPLEAEGVRRARLHASHADL
VIEVAAGTLPADAGTSRLQVWNKVDLAQAPAGWIGVSAKTGDGIDRLEAELIREVVRLTD
TGVAPPMTRARHRAGIDEAVGHLQAAQQLALPELRGEASRLAMQALGRLTGAIGVEDLLD
SVFGQFCIGK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacggtgacgcaaccattttcgcaagggcgaccggcagcgggcgagcggcgatc
gcggtgatccgcatcagtggagcgtccagcgggcacatcctgaagcggctggcgggcgat
gtgccggcgccgcgacgcgctgtggtgcgcgcgctccatgccagcgcgcacggcggggac
ctcctggacagggcgctggtgctgtggttcccgggacctggcagctataccggcgaggat
agtgccgaactgcatctgcatgcgggcccggccgtcatcgaggccgtctccgacgccctg
gtggccttgggtgcccgccctgccgaaccgggtgaattcaccaggcgggccttctcgaac
ggacggctcgacctgctggaagcagagggcatcgccgatctgatcgaggcagagacccag
agccagcgcaggcaggcgctgcgtcaggccgacggcgcgttgagccggctctatcacggc
tgggcggagcgattgcgatatctgctcgcacatcaggaagcgctgatcgactttcccgac
gaggacctgccgcccgagatcgaggcgggcttggtcagcgacctgggccggttgctggac
gacatgctggcacatctcgcccagggtgagcaggcgcagcggatccggtcgggcctggtg
gttgcggtggttgggccgccgaatgtcggcaagtcgagcctggtcaaccggctcgctggg
cgggacgcggcgatggtgtccgaatgggccggtacgacgcgggatgcgatcgaggtccgg
ctgatgctcggcggtgtgcctgtcactctggtcgacacggcaggacttcgcgagacgctc
gatcccttggaagcggagggggtgcgccgggcccgtttgcacgcgtcacacgccgatctg
gtaatcgaagtcgcggccggaacattgcctgcagacgccggaacgagccggctgcaggtc
tggaacaaggtggatttggctcaggcccctgccggatggatcggcgtcagcgcgaagacg
ggtgacgggatcgatcgactggaggcggaactgatccgggaggtggttcgcctcaccgac
accggagtggcgccgccgatgacccgcgcccggcatcgtgccggcatcgacgaggcagtc
gggcatctacaggcggcgcagcagctcgcgctgcccgagttgcgcggcgaggcatcgagg
ctcgcgatgcaggccctggggcggctgacaggcgccatcggcgtcgaggatctgctagac
agcgtgtttggacaattctgcatcgggaaatag
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