Lacticaseibacillus paracasei LOCK919: LOCK919_0784
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Entry
LOCK919_0784 CDS
T02729
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lcl
Lacticaseibacillus paracasei LOCK919
Brite
KEGG Orthology (KO) [BR:
lcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcl03400
]
LOCK919_0784
DNA repair and recombination proteins [BR:
lcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOCK919_0784
Archaeal homologous recombinant proteins
LOCK919_0784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGP67526
LinkDB
All DBs
Position
791603..794728
Genome browser
AA seq
1041 aa
AA seq
DB search
MQLKQLHMQFFGPYADAVVDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGERD
GGQMRSNFAGNSDLTKVTLTFDHDGKHYLIERQPPQLQSKKRGDGLTEVKAKVLLAISSD
EKQVAEYRKKNQVQEQLDAVLHLDASQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGT
QLIQRWQTAMLAQMKAKGAAIQDQERMLDVLMSQFDFETAPDEHATMADKLSLMRATVAS
QAKVVTARQATAAQSHQRYQEAQTALQQGQQLAQAFTEREQAATALAKLAEQKQTHQKQL
KQIEQLTWVQQHENAAQRVQKAGQDLKAAIVQSEQTQAALTTTEQKFSLDKQALARLQAK
SDQIEAQKKQLNSLQAVQQQLTAIAEQNKQVIKQAAIVNEAELALTHAQQQLTDAQTVKT
QQQTSLDNLGLDELITTVNTQRNLLAALAPQAANYQEAQADVAQLSMAIKKTQVTLEQAE
TQVAATTSHLNKLQQTQIRQQIAHLAAKLEPDSPCPVCGSTSHPHPALVVDEPLVSEAAL
KQADQERQKAAARKTMVETQLANLETQLKTAKAKTAQARQAFTEHWQEQAKLIAGVADKT
GILQQLTALKTLAATNEHQLTEAQTEHAALQVALKKSDKAITTGTTKVQQCEASLNTARI
DAAEAESALKTMQKNLPAEATDLATVAAQATTLQTTITTYQAQLQEAQARVNALDRQLAG
LQADEKHAAAQVTALTKEQAEAKATFTIAVTEYFGADGKQRFAELQLRVSQLPLLNEQVQ
TYEHTQLKQQTLLDAANKTIGTQAQPQLDQLEAEATAAETTATNDQTALIKISQAHDAAE
KLAKQAATIFTVNQTALAAYADLQTLATVMNGNGPKKLSLERYVLQAYLQEILNVANSRL
QVLSNNRYQFVLHTSLGTQKIHSGLEIDVYDDQVGEKRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDANSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVEPAGTGRSRLKILHSA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaaacaattacacatgcaattttttggtccatatgcagatgcagtcgttgat
tttgacgattttcgtaccagtcccttattcttgatcagcgggccaaccggcagtggtaaa
accacgatttttgatgctttgatttatgccttgtatggtgaaacgtcaggtgagcgtgac
ggtgggcaaatgcgctcaaattttgcaggtaacagcgatttaacaaaggtgacactcacc
tttgatcatgatggcaaacattatttaatcgagcgccaaccgccgcaattgcaaagtaaa
aaacgcggcgatggactaaccgaagtcaaagctaaggtgttgctagctatctcctcagat
gaaaaacaggtggctgagtaccgtaagaaaaatcaagttcaggaacagctagacgccgtt
ttacaccttgatgcttcgcagtttcgacagattgttttgttgccacaaggcgattttcgc
cggttcttagatgctgatagcaatgcgaaagaagatctactgcgtgacttgttcggtact
cagttgattcaacgttggcaaaccgctatgttggcgcagatgaaagccaagggagcagcc
attcaggaccaagagcggatgttagacgttttgatgtcgcagtttgacttcgagacggct
cctgacgagcatgctacgatggcggataagctgtcattgatgagagcaacggtggcgagt
caagcgaaagttgtgacagcaagacaagcgaccgcggcgcaaagtcaccaacgatatcag
gaagcacaaacggcactgcaacaggggcaacaattggcgcaggcttttacagagcgagaa
caagccgccacagctttagcaaaactggcggagcaaaaacaaacccatcagaagcaatta
aaacaaattgaacaattgacatgggtacagcaacatgaaaatgctgctcaacgtgttcaa
aaggctggacaagatcttaaagcggcaattgtgcagtctgaacaaacgcaagcagcttta
acgacgaccgaacagaaattttctctggacaagcaagctttagcacgcttgcaggccaaa
tcagaccagattgaggcccaaaagaaacaactgaatagtttacaggctgttcagcaacag
ttgacagccatcgccgaacaaaataaacaggtgattaaacaagcagcaattgttaatgag
gctgagcttgcgttgacgcacgcacaacagcagttgacggacgcccaaaccgttaaaaca
cagcagcaaacaagtctggataacttgggcttggatgagctgataaccacggtcaatact
cagcgcaacttattggctgccttagcgccacaggctgctaattatcaggaagcccaagct
gatgttgcacagttgtctatggccatcaaaaaaacccaagttacgctggagcaagccgaa
acgcaggtagcagccacaacctcgcatttgaacaagcttcagcagactcagattcgccaa
caaattgcacatttggctgctaagctcgagcctgacagcccatgtcctgtttgcggcagt
actagccatccgcatccggcgcttgtggttgacgaaccattggtgagcgaagcagcgttg
aaacaagccgatcaggaacggcaaaaggctgccgcaagaaaaactatggtcgagacacaa
ttggcgaatcttgaaacccaactgaaaactgcgaaggccaaaactgcacaggcaaggcag
gcttttactgagcattggcaagaacaggccaaactgattgcaggcgttgcggataaaact
ggtattttacaacaattaacggcgttgaaaacactggcggcaactaacgagcaccagtta
acggaagcgcaaacggagcacgctgctttgcaagttgcgctaaaaaagagtgacaaggcc
atcactaccggtacgacaaaagttcagcaatgcgaagctagtttgaacacggctagaatt
gatgcggctgaagcggaaagtgcgttgaagaccatgcaaaagaacctgcccgcggaagcg
acggatttggcgacggtcgctgctcaagctacaaccctgcagacaaccattacaacgtat
caggctcaacttcaggaggcgcaggcaagggtcaatgctttggatcggcaattagccggg
ttgcaagcagacgagaaacacgccgcggcacaagtgactgctttgaccaaggaacaggcg
gaagcaaaagcaacctttacgatagcagtcacggagtattttggtgctgatggcaagcaa
cggttcgccgagttgcagctgcgggtatcacaattaccgctgttgaacgaacaggttcag
acttatgagcatacacagctcaaacaacaaacgttattagatgccgccaataaaactatt
ggtacccaagcacagccacagcttgatcagcttgaggccgaagcaacagcagcggaaacg
acagcaacaaacgaccaaacggctttgattaagattagtcaggcgcatgatgctgctgaa
aaattggccaaacaagcggccactatctttacggtcaatcaaacggcgcttgcagcctac
gcggatttacaaacactggccactgtgatgaatggaaatggtcccaagaaactcagtctg
gagcgatacgttttgcaggcttatttgcaagaaattctgaatgtggccaatagccgtctg
caggttttgtccaataaccggtatcaatttgttttgcataccagcttggggacgcagaag
atccactctgggttggaaattgatgtttacgatgatcaggttggtgagaaacgagctgtg
cagacgctatcaggcggtgaaagcttcatcgctgcccttagcttggcgctggctttaggg
gaagtgattcagcaggaaagcggcgggattaatattgatgcattgtttgttgatgaaggc
ttcggcagccttgatgccaatagtcttgatgtggcgatgaatgcgttagaatcattagaa
ggcgaatcgcggctaatcggcatcatttcacatgtgaccgagctgcgggataatattccc
gatcagttgcaagttgagccagcaggtacgggccgcagtcgcttaaagatccttcactcg
gcttag
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integrated database retrieval system
