Lacticaseibacillus paracasei LOCK919: LOCK919_1068
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Entry
LOCK919_1068 CDS
T02729
Name
(GenBank) Hydrolase, HAD superfamily
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lcl
Lacticaseibacillus paracasei LOCK919
Pathway
lcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOCK919_1068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcl03019
]
LOCK919_1068
Messenger RNA biogenesis [BR:
lcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LOCK919_1068
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
AGP67771
LinkDB
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Position
1042160..1043734
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AA seq
524 aa
AA seq
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MMSSVTLVSITLAAVIALAVGLLIGFALQKKLHQNNLDRATQTAEGIIEAAKKEAATLKK
EKLLEAKDENHRYRTQLEDELKDRRTEVQKSEHRLNQREDTLDRRDDTLDRKEQSLADRE
ANLNKRQQQLDEREQDISSEISKQHTELERIAELTHEQARQQILDQTQSELTHERAVMIK
ESEDEAKEAADKKAKVLIADAIQRSASDIVAETTVTVVNLPNDDMKGRIIGREGRNIRTL
ETLTGIDLIIDDTPQAVVLSGFDPIRREIARIALEKLIQDGRIHPARIEEMVDKARKEMD
DRIREIGEQAIFDVGIHNMHPDLIKILGRLHFRTSYGQNVLDHSIQVAKLTGVMAAELGE
DVTLAKRAGLLHDIGKALDHEVDGSHVEIGVELATKYKEPKTVINAIASHHGDVEPTSVI
SVLVAAADAISAARPGARSESLENYLHRLEKLEAIANSHAGVDHSFAIQAGREVRVIVQP
EKLSDDQSVILARDIRNEIEKELEYPGHIKVTVIRETRTVEYAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttcagtaacactggtctcaataaccctcgcagcagtcatcgctttagcggtc
ggtttattgatcggatttgcacttcaaaagaagctccaccagaacaatttggatcgagcg
acgcagacagcagaaggcattattgaggccgctaaaaaagaagcagcgactttaaaaaaa
gaaaaactgctggaagcaaaagacgagaatcatcgctatcgaacccaacttgaagatgaa
ttgaaagatcggcggacagaagtccagaagtcggaacatcgactgaatcagcgagaggat
actttggatcggcgggacgatacgctagatcgcaaggaacaaagtcttgctgaccgggaa
gcaaatttgaacaagcggcagcaacagctagatgaacgtgaacaagatatctcttcagaa
atcagtaaacagcacacagaacttgaacggatcgccgagttgactcatgaacaggctcgg
cagcagattcttgaccagacacaatcagaactgacgcatgaacgcgccgtgatgatcaaa
gaaagcgaagatgaagctaaggaagccgcggataagaaagctaaagtactgatcgccgat
gcgattcagcgcagcgcttctgacatcgttgccgaaacgacagtgaccgtggtgaacttg
ccaaatgacgacatgaaaggccgaatcatcggccgtgaaggtcgaaatattcggacactt
gagactttgacaggtatcgatttgattattgatgataccccacaagccgttgttttgagc
ggctttgacccaattcgccgggaaatcgcgcgaattgctttggaaaaactcattcaagat
ggtcggatccatccagcacgaattgaggaaatggttgataaggcgcgcaaagaaatggac
gaccggattcgtgaaattggtgaacaagccattttcgacgtcggtatccataatatgcat
cccgatctgattaagattttgggccgattgcacttccgtacgagttacggtcagaacgtt
ctggatcattcgattcaggtcgccaaactgactggtgtgatggctgctgaattaggagaa
gatgtcaccttagcgaaacgcgcggggttattacatgatataggcaaggcgcttgaccat
gaagttgacggatctcacgttgaaatcggggttgagctggcaacgaagtataaggaacca
aagacggtcatcaacgccattgcatcgcatcatggtgacgttgaaccaaccagtgtcatt
tcggtactggttgccgcagcagatgcgatttcagctgcccgcccaggcgcgcggtcggaa
tcgcttgaaaactatcttcatcgtttggagaaactagaagcaatcgccaacagtcatgct
ggcgtggatcatagtttcgctattcaagcaggtcgagaagtccgggtcatcgtccaaccg
gaaaagctctctgatgatcagagcgtcatcttggctcgtgatattcgcaatgaaattgaa
aaagaactggagtatccaggccatatcaaagtcaccgtgattcgggagacaaggactgtg
gaatacgccaagtaa
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