Lacticaseibacillus paracasei LOCK919: LOCK919_1139
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Entry
LOCK919_1139 CDS
T02729
Name
(GenBank) putative hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lcl
Lacticaseibacillus paracasei LOCK919
Pathway
lcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LOCK919_1139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcl03019
]
LOCK919_1139
Messenger RNA biogenesis [BR:
lcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LOCK919_1139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
RMMBL
Ish1
Lactamase_B_3
Anti-Pycsar_Apyc1
BRK
Motif
Other DBs
NCBI-ProteinID:
AGP67841
UniProt:
A0AAP4JJ87
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All DBs
Position
complement(1118492..1119733)
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AA seq
413 aa
AA seq
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MTTIRFLNGLNTIGGNIVEFATKTSRVIMDFGVAADLSNETVSSAIDNGKLPHVPELFFD
QPDVYTHEAIFISHLHIDHMGALQYLKKPIPIYLSEPSYKLYQLLIKLGIEKPVANLHPL
AYEQPLTIGDLTVTGFHSDHDEPGVMALLVDDGSRRYAHSGDVRLNGPHAERVHAWAKRF
NQEKLSLFMLEGTSFSFDTAAPVEDQDHPSIPLTEMSLQKQFQTVLAESPTLVVINPYIR
NYERLSSFQASAHTAGRQLVWEPDDAAVLTTMTDQKPDAILGQTISLTDIARDPQHYVLQ
NSFDHLERLTDMPITTYIHSNGEPLGDYDPRFAQLKDWLEAHHIPLQFMNASGHASREDL
ITLAKEVNPRTIVPWHSFHPEREAEALDTQTNAAVVLPERDLYYDFDELNEEE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacaattcgctttttaaatgggttaaacaccatcggcggcaacatcgtcgaattc
gcaactaaaaccagccgcgttatcatggacttcggcgtggctgctgatctcagcaacgaa
acagtcagctctgccatcgataatggtaaattgccgcatgtgccggaactattttttgat
caaccagacgtttacacacatgaggccatctttatctcacatctgcacattgaccacatg
ggtgcattgcaatatttaaagaaaccgattccgatttatctttcggaaccatcctataag
ctctatcaactgttaatcaaactaggcatcgaaaagccagttgcaaatctgcatccgctt
gcctatgaacagcccttaaccatcggtgacctcaccgtaacaggtttccacagtgatcac
gacgagccgggcgtcatggcgctcctagtcgatgacggctcacgccgctacgcccattct
ggcgatgtccggctaaatggcccgcatgctgaacgggttcatgcctgggccaagcgattt
aaccaagaaaagctaagcttgtttatgttggaaggcaccagcttctcttttgatacagct
gcaccagtcgaagatcaggatcaccccagcatcccattgaccgaaatgagcctgcagaag
caatttcagacagtgttggcggaaagcccgacgcttgtcgtcatcaatccttacatccgc
aattacgagcgtctgtcgagttttcaggccagtgcacacactgccggccgtcaattggtg
tgggaacctgatgacgcggctgtgctgaccaccatgaccgatcaaaaacccgatgctatt
cttggtcaaacaatcagtctgacggacattgcccgtgatccccaacactatgtcctgcaa
aatagttttgaccatctggaacgactgactgacatgcccatcacgacctacatccacagt
aacggcgagccactaggcgattacgacccgcggtttgcgcaactcaaagactggctagaa
gcgcatcacatccccttgcagttcatgaatgcctcgggtcatgctagccgtgaggattta
attactttggcgaaagaagtcaatcctcgaaccattgtgccatggcatagcttccatccg
gaacgcgaagccgaagccttggatacccaaacaaatgccgctgtggtgcttcctgaaaga
gatttgtactatgattttgatgagttaaatgaagaggagtaa
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