Lacticaseibacillus paracasei LOCK919: LOCK919_1574
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Entry
LOCK919_1574 CDS
T02729
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lcl
Lacticaseibacillus paracasei LOCK919
Brite
KEGG Orthology (KO) [BR:
lcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcl03032
]
LOCK919_1574
03400 DNA repair and recombination proteins [BR:
lcl03400
]
LOCK919_1574
Enzymes [BR:
lcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LOCK919_1574
DNA replication proteins [BR:
lcl03032
]
Prokaryotic type
DNA Topoisomerases
LOCK919_1574
DNA repair and recombination proteins [BR:
lcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LOCK919_1574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
C1_2
Motif
Other DBs
NCBI-ProteinID:
AGP68271
UniProt:
A0AAP4N9S2
LinkDB
All DBs
Position
1537064..1539148
Genome browser
AA seq
694 aa
AA seq
DB search
MADKKLVIVESPAKAKTIEKYLGRTYKVVASLGHIRDLPKSQMGVDVDNDYEPKYISIRG
KGDVIKSLKKDAKKASKIYLAADPDREGEAIAWHVSHILGLDPKAKNRVVFNEITKDAVK
NAFKTPRGIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALKLIIDRE
NEIKNFTPEEYWSLDAEFQKGRSKKFSASFYGLKNKKQALKNNEAVQKILGQVDKTKPFA
VTNVVKKERKRFPSPPFTTSTLQQEANRKLGFRTRKTMMLAQQLYEGINLGGKLGTVGLI
TYMRTDSTRVSNVAKTETSHYLHEKYGEAYAAVKIRQGKLQEGAQDAHEAIRPTSTLRTP
DSLTAVLDKDQMKLYRLIWSRFVASEMTPAIIDTVAVTLDQNGVTFRANGSQTKFEGFTK
LYVSSRDSDQKDNILPPLAVGDYVKMLKTDPAQHFTQPPARYSEANLVKALEENGVGRPS
TYAPTIETIQKRYYVKLNARRFEPTELGEIVNSLIVEFFPDIVNIKFTANVESELDGIET
GEADWVKVIDQFYKPFEKEVAHAETGIAKIQIKDEPAGFNCDICGAPMVIKMGRYGKFYA
CSRFPDCRNTKAIVKEIGVVCPKCHIGQVVERKSKRNRVFYGCSRYPDCDFVSWDKPVGR
DCPVCGHFLVEKKSKAGTQVVCPNNDYKEALQKA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagaagttagtcattgttgaatcgccagccaaagccaagactattgaaaag
tatcttggtcgaacctataaagttgttgcaagtttggggcacattcgcgatctacctaag
agtcagatgggggtcgatgtcgataacgactacgagccaaagtacatttcgattcgcggc
aaaggcgatgtgattaaatcccttaaaaaagatgctaaaaaagctagcaagatttatctc
gcagccgatccggatcgtgaaggagaagccattgcatggcatgtcagtcacattttaggt
ttggatccaaaagccaaaaatcgcgtcgtttttaacgaaattacgaaagatgccgttaaa
aatgcgttcaaaacccctcgtggcattgatatggatcttgtagatgcccagcaggcacgg
cggattttggatcgactggtaggctattccatcagtcctttattatggaagaaagttaaa
aaaggcctgagtgctggccgcgttcaaagtgttgcgctaaagctgattattgatcgcgaa
aatgaaatcaaaaacttcacgccagaagaatactggtcattagatgctgagttccaaaag
ggccgtagtaaaaagttcagtgctagtttctatggcctgaagaataaaaagcaggcttta
aagaacaacgaagccgttcaaaagattttgggccaagtggacaaaactaagccgtttgct
gtgacgaatgttgttaaaaaggaacgcaagcgcttcccatccccgccgttcacaaccagt
accttgcagcaggaagctaaccgtaagttgggattccgcacccgaaagaccatgatgttg
gcccagcaactgtatgaaggaattaacttaggtggtaagttaggcaccgttgggctgatc
acgtacatgcgtaccgactcgactcgcgtgtcaaatgttgccaaaactgaaaccagccat
tacctgcatgagaaatacggcgaagcttatgctgccgtcaaaattcgccaaggtaaactg
caggaaggggcacaagatgcccacgaagccattcggccaaccagcacattacggacaccg
gatagtttgacggcagttttggacaaggatcagatgaaactttatcggctgatctggagt
cggtttgttgccagtgaaatgaccccggcgattattgacactgtggccgtgacgttagac
caaaacggtgtgactttccgcgccaacggtagtcagactaagtttgaagggtttaccaag
ttgtatgtctcatcacgtgacagcgatcaaaaggacaatattttgccaccgcttgcagtt
ggtgattatgtcaaaatgttgaagaccgatccggctcaacactttacacagccaccagcc
cgttactcggaagcaaaccttgtcaaagcgcttgaagaaaatggcgttggtcgtccgtca
acttatgcgccaactatcgaaaccattcagaaacgttactacgtgaaactgaatgctcgc
cggtttgaaccgactgaattaggtgagatcgtcaacagcttgatcgttgaattcttcccg
gacatcgtgaatatcaagtttacggcgaacgtcgaatctgaacttgatgggattgaaacc
ggcgaggctgattgggttaaggtgattgatcagttctataagccatttgaaaaagaagtg
gctcacgccgaaactgggatcgcgaagattcaaatcaaagacgaaccagccggcttcaac
tgtgacatctgcggtgcgccaatggtcatcaaaatgggtcgctatggtaagttttacgcc
tgttcccgattcccggattgccgcaacaccaaggccattgtcaaagagatcggggttgtc
tgcccgaaatgtcatatcggtcaagttgttgaacgtaagagcaagcgtaaccgcgtcttc
tatggttgctcgcgttatccagactgcgactttgtctcatgggacaaaccagtcggccgc
gattgcccggtctgcggacatttcttagttgagaaaaagagcaaagctggcacccaagtc
gtctgcccaaataacgattataaagaagccttgcaaaaagcataa
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