KEGG   Lacticaseibacillus paracasei LOCK919: LOCK919_1679
Entry
LOCK919_1679      CDS       T02729                                 
Name
(GenBank) RNA polymerase sigma factor RpoD
  KO
K03086  RNA polymerase primary sigma factor
Organism
lcl  Lacticaseibacillus paracasei LOCK919
Pathway
lcl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lcl00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LOCK919_1679
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcl03021]
    LOCK919_1679
Transcription machinery [BR:lcl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LOCK919_1679
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1 DUF6753 DUF6465
Other DBs
NCBI-ProteinID: AGP68376
UniProt: K6RE91
LinkDB
Position
complement(1650728..1651996)
AA seq 422 aa
MADKKTATEVDKTTKKTTAKPAAKTAAKTTAVKAAAKKTTAKKTTVKKTTASSKRTTKTT
TKAFDDAVKAVIKDYKKKKQITEDDLTDKLVKPFELKSGAIDDLMQKIEDNGIAIVDENG
EPAAISLKKQKKVSKKEMSDMSAPSGVKINDPVRMYLKEIGRVSLLTADEEVALALKIEQ
GDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKGFKFSTY
ATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIGAEMDMP
TEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPEDHASYELLKEQLESVLDT
LTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDF
LE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggctgataaaaaaacagcaactgaagtagacaagaccacaaagaagacaacggctaag
ccagcagcaaaaactgcggctaagacaaccgctgtcaaggcggcggcaaaaaagaccacc
gcgaagaaaactacggtcaagaagactaccgctagcagcaaacgcacgaccaaaacgaca
acgaaagcattcgacgatgctgtcaaggccgtgattaaagattacaagaagaagaaacaa
attactgaagatgacctgaccgacaagttggttaagccgtttgagctcaagagtggagcc
attgacgatctgatgcaaaagatcgaggataatgggattgctattgttgatgaaaatggc
gagccagcagcgattagcttgaagaagcaaaagaaggtttccaagaaggaaatgagtgac
atgtccgcgccttcaggggtcaaaatcaatgaccctgtgcggatgtacctgaaggaaatc
ggccgagtttccctgctgacagctgatgaagaagttgcccttgccttgaagattgaacaa
ggtgatcaagaagctaagcaacgtttggctgaagctaacttgcgattggttgtttccatc
gctaagcgttatgttggtcgcggcatgcaattcctggatctgattcaggaagggaacatg
gggctgatgaaggcggtcgagaaattcgattaccggaaaggctttaagttctcaacgtat
gccacctggtggattcggcaggctattacccgtgccatcgctgaccaagcccggacaatt
cggattccagtgcatatggttgaaaccattaacaaattgattcggattcaacggcaactg
cttcaagaccttggtcgtgaaccaacgcctgaagaaatcggcgcggaaatggacatgcca
actgaaaaggttcgcgaaatcctgaagattgcgcaagaacctgtttccttggaaacgcca
attggtgaagaggatgattcacatcttggcgacttcattgaagaccaagacgccaccagt
cctgaagaccatgcttcctatgaactgcttaaagaacagttggaaagtgtgctggatacc
ttaacggatcgtgaagaaaatgttttgcggttgcgttttggactcgatgatggccggacc
cgtaccttggaagaggtcggcaaggtctttggcgtgacccgcgagcgaattcgtcaaatc
gaagctaaggcattgcggaagctccgccacccaagccgttccaagcaacttaaggatttt
cttgagtaa

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