Lacticaseibacillus paracasei LOCK919: LOCK919_1778
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Entry
LOCK919_1778 CDS
T02729
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lcl
Lacticaseibacillus paracasei LOCK919
Brite
KEGG Orthology (KO) [BR:
lcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcl03019
]
LOCK919_1778
03009 Ribosome biogenesis [BR:
lcl03009
]
LOCK919_1778
03036 Chromosome and associated proteins [BR:
lcl03036
]
LOCK919_1778
Enzymes [BR:
lcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LOCK919_1778
Messenger RNA biogenesis [BR:
lcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LOCK919_1778
Ribosome biogenesis [BR:
lcl03009
]
Eukaryotic type
90S particles
RNase
LOCK919_1778
Prokaryotic type
rRNA processing factors
LOCK919_1778
Chromosome and associated proteins [BR:
lcl03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LOCK919_1778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Dicer_dsRBD
DND1_DSRM
DUF6614
Motif
Other DBs
NCBI-ProteinID:
AGP68473
LinkDB
All DBs
Position
complement(1744247..1744942)
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AA seq
231 aa
AA seq
DB search
MVASEFVSELRQRYGIEFHDLSLLDEAFTHSSYVNEHKELGLKDNERLEFLGDAVLELTV
SDYLYRKFPDKPEGDLTRIRAAAVQTAAFSAFSKEAHFDRYIKLGKGEEKAGARKRLTLL
EDLFEAFNGALYLDQGRDANIRFAEQIIFPKIDAGEFSADQDHKTALQEVLQQNGDVAIV
YHLLDEQGPAHERQFHVDVEVDGRVLGTGFGKNKKAAEQAAAKAALASLKR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggttgcctcagagtttgtgagtgaattgcgtcaacgttatgggatcgagtttcatgat
ctcagtcttttggatgaggcgtttacgcattcctcatatgtgaatgaacataaagaatta
ggtttaaaagacaatgaacgattggaatttttaggcgatgctgtcttggaattgacagtt
tcagattatttgtatcgcaagtttcccgacaaacccgaaggcgatctcacccgaattcgg
gcagcggctgttcagacagcggccttctcggctttttcaaaagaagcgcatttcgaccgg
tatattaaacttggtaaaggtgaggaaaaggctggggcgcggaagcgcttaacgctgcta
gaagatttatttgaggccttcaatggcgccttataccttgatcaaggccgcgatgccaac
attcggtttgctgagcagattattttcccgaaaattgatgcgggagagttttcagccgat
caagaccacaaaacggctttacaggaagttttgcagcaaaatggtgatgtggcgattgtc
tatcacttattagatgagcagggaccagcccatgagcggcagttccacgttgatgtcgaa
gtcgatggccgggttttgggtaccggttttggcaagaataagaaagcggctgagcaagct
gctgcaaaagctgcattagccagcttgaaacggtaa
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