Lacticaseibacillus paracasei LOCK919: LOCK919_1879
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Entry
LOCK919_1879 CDS
T02729
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lcl
Lacticaseibacillus paracasei LOCK919
Pathway
lcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOCK919_1879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcl03400
]
LOCK919_1879
Enzymes [BR:
lcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LOCK919_1879
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LOCK919_1879
DNA repair and recombination proteins [BR:
lcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOCK919_1879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
BapA_N
Auto_anti-p27
GGDEF_2
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AGP68573
UniProt:
A0AAP4JI37
LinkDB
All DBs
Position
complement(1839551..1840399)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVRRSLLPLVKNKVITAINTNWEKILINGLATFQKEIVGSEITTIDRRGKYL
LMRLSNGETIISHLRMEGRYYVVKDASTPFDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
KTGQEDQVPALAKLGPEPTPRTFDETEFARRLKRHHKPIKSVLLDQTVVAGVGNIYADEV
LWLSRLNPLQPADTLKSKEIKTLHDAIIQELNAAIAAGGTSAHTYVDAEGNRGSFQNALH
VYDREDTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHQRRRPA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtggaaacagttcgccgctcgcttctgccgttagtcaaaaat
aaagtcattactgccatcaacactaactgggagaaaatcctgatcaatgggttggcgact
tttcaaaaggaaattgtcggcagtgagatcacgaccattgatcggcgcggcaagtatctt
ttgatgcgcctcagcaatggtgaaacgattatcagccatctgcgtatggaagggcgttac
tatgttgtcaaagatgcaagcacaccttttgataagcatgatcacgttacgttcacattt
caggatggtagtcagttgcggtatcgggatctgcgaaagttcggtcggatgcgattgatt
aaaactggtcaggaagatcaggtgccagctcttgctaagctcggaccggaaccaacgcca
cgcacgtttgacgagactgagtttgcccggcgcctgaaacgccatcataaaccgattaag
tcggttttactcgatcaaaccgtggtcgctggtgtgggcaatatttacgctgatgaggta
ctttggttaagtcggctcaatccgctgcagccagctgacaccttgaaatctaaagaaatc
aaaacactgcatgacgcgattatccaagaattaaacgcagccattgcggcaggcggcacc
agcgcgcatacgtatgttgatgcagaaggcaatcgcggttcttttcaaaatgccttgcac
gtctatgatcgggaagataccccgtgcgatcgctgcggcacgacgattgtcaaaattaag
gttggtcagcgcggaacccattactgcccacactgtcagccattacatcaaaggaggcgg
ccagcgtga
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