Lacticaseibacillus paracasei LOCK919: LOCK919_2861
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Entry
LOCK919_2861 CDS
T02729
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lcl
Lacticaseibacillus paracasei LOCK919
Pathway
lcl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOCK919_2861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcl03400
]
LOCK919_2861
DNA repair and recombination proteins [BR:
lcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOCK919_2861
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LOCK919_2861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
DnaJ_CXXCXGXG
nSTAND1
AAA_21
AAA_16
RsgA_GTPase
AAA_23
AAA_25
nSTAND3
Viral_helicase1
Zn_ribbon_TFIIB
ATPase
Motif
Other DBs
NCBI-ProteinID:
AGP69524
UniProt:
A0AAP4JHX9
LinkDB
All DBs
Position
2806059..2808587
Genome browser
AA seq
842 aa
AA seq
DB search
MAIPDHISVRGAYVNNLKHLNVDIPLNKLVAITGRSGSGKSSLAMGVLYAEGMRRYMSAL
STYTRRRLGQTSPAAADSVRHIPSAIALRQRPTVPGIRSTVGTATEALNVIRLMFSRLGS
PVCPNGHRVSPTLDIAKAMDLPNDGESGMGMITCPTCGVRFMAFAAEDFAFNSTGACPTC
GGTGQARTLAANRLIPDQTLTIRQGAVASWRLPGRNFMPFVAQAIGIDIDTPFQDLPKDQ
QEQVWHGERKKYAINIPSKTGKIFHMDHAQYENAFNAVEDSLATTKNERAIQRLNRFYEF
GICPTCHGSRFAPKLLSQHLVDQNIAQVSDMTLTQLAAFIPEIYHWLPADMQSLAHDIIQ
ELTQLLKPIMDLGLSYLTLSRAAASLSTGELQRIQLSRTLRTETTGVLYVLDEPSIGLHA
ANVSGLLEVMHGLVNQGNSLVVVDHNTAIIEAADQVIEIGPGAGVAGGRLIDQGSPEAIS
HDTHSLIAPFLTGAAPLIVRPQAGEQEIKQTKQLQLTVTDRFNLHDLHVHFPVNCFSVVS
GFSGAGKSTLIFDALVPALSATADQPAPAFVRDLDRGGLRHVVAIDATPVGKNVRSTVAT
YTDILDHLRHLFASLPDAKAKHYTSSHFSYNVKAGACPTCGGTGVINLDIQYLPDMQQTC
PTCHGRRYNPEVLKIKWQQHSIADLLDLDVDSALTVLKDEPAITHTLQTLHDMGLGYLHL
GESTPTLSGGEAQRLKLVAHMGRSQKDTLFVFDEPSVGLHPLDVQTLIAVFQRLLKTGAT
VIAIEHDLDVIANADYVLDLGPKGGAEGGRVMAAGTPQAIAKQGKGETAPYLAAHLAAFH
VK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcccgatcatatcagtgttcgcggcgcttacgttaacaacttgaagcatctc
aatgttgatattccgcttaacaaactggtggcgatcactggtcggtctggttccggtaaa
agttcattagccatgggcgtgttatacgctgaaggtatgcgccgctacatgagtgccttg
tccacctacacccgccggcgccttggccaaacaagtcctgctgctgctgactcagtacgc
catatccctagtgccatcgctttgcggcagcggccaaccgttccaggcatccgctcaact
gtcggtacggccacagaagcgctcaacgtcattcgcctcatgttttcccgtctcggctcg
ccggtttgtcctaatggtcaccgcgtgtcgccaactctcgatattgccaaggcaatggat
ctgcccaatgacggtgaaagtggtatgggcatgatcacttgtccgacctgtggcgtccgt
ttcatggcttttgctgctgaagatttcgccttcaattcaactggcgcctgcccgacatgc
ggcggtactggtcaagcgcgcacactggccgccaaccggctcatccctgatcaaacactg
acaatccgtcaaggtgccgtggcctcgtggcgcttacccggtcgcaattttatgcctttt
gtcgcacaagcaatcggcattgatattgatacgcctttccaggacctgccaaaagatcag
caagaacaggtttggcacggtgaacgtaaaaaatacgccatcaatatccccagcaaaacc
ggcaaaatttttcatatggaccatgcacagtacgagaatgccttcaatgcggtcgaagat
tctttagcgacgaccaaaaatgaacgcgccattcagcggctgaatcgcttctatgagttt
ggcatctgcccgacctgccatggcagccgatttgccccgaaattattgagccagcaccta
gtggatcaaaacattgctcaggttagtgatatgactttaacgcaattagccgcgttcatt
cccgaaatttatcactggttgccagcagatatgcagtcactggcgcacgatattatccaa
gaactgacgcaattgcttaagcccatcatggaccttggcctcagttacctgaccctgagt
cgagccgcggcttccttatcgactggtgaattgcaacgcattcagctcagtcgcacgctt
cggactgaaacgaccggcgtactttacgtccttgatgaaccgtccatcggtctgcatgct
gcaaacgtttctggattgctagaagtcatgcacggtttggtcaatcaaggcaactcgctg
gtcgttgtggatcacaacaccgccatcattgaggcagccgatcaagtgattgagattggt
cccggtgcaggcgttgctggcggccgactcattgatcaaggtagccctgaagcgatcagc
catgatacccattcgttgattgcaccctttttaaccggagcggctcccttgattgttcgc
ccgcaagccggtgaacaagaaattaagcaaaccaaacaactgcaattaaccgtaactgat
cgatttaaccttcatgacctgcatgtccattttccagttaactgcttctcagtggtatcc
ggcttttctggtgctggcaagtcaactttgatttttgacgccctagtaccagcgctgtca
gcaactgctgaccaaccagctccagcatttgttcgtgatcttgaccgcggcggcctgcgc
catgtagttgcgattgatgctacgccggtcggtaaaaatgtccgctcaaccgtcgccacc
tacacagacattctcgaccatctgcgacaccttttcgccagtttgcctgatgccaaagcc
aagcactatacgagtagccatttctcttacaacgtcaaagccggcgcgtgcccgacatgc
ggcggtaccggcgtcattaacttagatatccagtatctgcctgacatgcagcaaacttgc
ccgacttgtcacggccgtcgctacaaccccgaggttctgaaaatcaaatggcagcagcac
agcatcgccgacttgctagatctggacgtggactccgccttgaccgttctgaaagacgaa
ccggctattactcacacattgcaaaccctgcatgacatgggcctcggttatttgcattta
ggtgaaagtaccccgacgctgtctggcggtgaagcgcagcgcctgaagctagttgcccac
atgggacgctcccaaaaagacacgctttttgtcttcgatgaaccatcggtaggtctacac
cccttggatgttcaaacgttgatcgctgtttttcaacggttgctcaaaaccggtgcaacg
gttattgccatcgaacacgatctagacgtcatcgctaacgctgattatgtcttggatctc
ggaccaaaaggcggtgcagaaggtggccgcgtcatggctgctggcacaccgcaagcaatc
gccaaacaagggaaaggtgaaactgccccttacttggcggcccatctggcggcctttcac
gttaagtag
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