Latimeria chalumnae (coelacanth): 102345148
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Entry
102345148 CDS
T02913
Symbol
HCN3
Name
(RefSeq) hyperpolarization activated cyclic nucleotide gated potassium channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102345148 (HCN3)
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
102345148 (HCN3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
102345148
NCBI-ProteinID:
XP_006001714
LinkDB
All DBs
Position
Un
AA seq
1028 aa
AA seq
DB search
MDSDTGKDRKGSVPKDGRKLKGSLPSLTNRNSQDCELEEKQLIMDGETTMQEEESCSGAD
GGGSSGKDERSGPSQKPLTGLNQKEPASSFSSPTPSSQQKSVGFVKAEASDQILPDAEEA
YSNQSTFMQRQFGAMLQPGVNKFSLRMFGSHKAVEIEQERVKSAGFWIIHPYSDFRFYWD
LIMLLLMVGNLIILPVGITFFKDENTPPWIVFNVLSDTFFLVDLVLNFRTGIVVEDNTEI
ILDPHTIKMKYLKSWFLVDFISSIPVDYIFLIVDLETQVDSEVYKTARALRIVRFTKILS
LLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQD
FPEDCWVSINHMVNDSWGKQYSHALFKAMSHMLCIGYGAQAPEGMTDVWLTMLSMIVGAT
CYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHEYYEHRYQGKMF
DEENILGELSEPLREEIINFNCRNLVANMPLFANADPNFVTAMLTKLRFEVFQPADYIIR
EGTVGKKMYFIQHGVVSILTKGNKETKLSDGSYFGEICLLTRGRRTASVRSDTYCRLYSL
SVDNFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLRKGAENQNAGSGNNRDNEIIQQ
IVKHDRDMAHTVQDLQHMGTTRELASKQVIWEPLVHAPLQTAAATTNVAIALTHQHGMST
TIYLPPSSICSPLSPEVAQLSRQPRRSQPSLHGSRPSSVSSPSGVLSHMQTPTAGSPMSP
LVQSQQVADSVQQGRLSLGGPPQQYLQSLAGGSLTGLIEEQSLAKKPTTGSSQTQLSHSR
AASISTSVLQQPASVSVTSPEQSPMSGRTLHYSFSKAMGSHSSLPMHQASSTPQQLVKHK
SIQGLPIGKLTQDVRLLSASQPALPNKGAQQLNRSPSQYARKSAGNITHLSSSVPGLLAK
PSIGSTGQIVHPQPTSSGPVVPPRRPSSGAQTPQASASTPKDLPTPKKGSVAFSPDLEPG
RPKLPSNM
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatactggcaaggaccgtaaaggcagtgttcccaaggatggacggaaactt
aaagggagcctcccttccctgacaaacagaaattcacaggattgtgaactggaggagaag
caattgatcatggatggagagacgacaatgcaagaggaggagagttgtagtggtgctgat
ggtggtggatccagtggaaaggatgaacgctcagggccaagccagaagcctttaacggga
ttaaatcagaaagagccagcctcttctttctcctcccctaccccatcatctcaacagaaa
tcagtgggatttgtaaaggcagaagcctcagatcagattttgcctgatgcggaggaagct
tattccaaccagtcgacttttatgcaaaggcagtttggggctatgctgcaaccgggggtc
aacaagttctccctgcgtatgtttgggagccacaaggcagtggaaatcgaacaagaaagg
gttaaatctgcaggattctggattatccatccttacagtgatttcaggttttactgggat
ctgatcatgctgctattaatggtgggaaacttaatcatccttccagtaggaatcaccttc
ttcaaggatgagaacacccctccctggattgttttcaacgtcctgtcggacacgttcttt
cttgtggatttggtactgaacttccggaccgggatagtggtggaagacaacacagagatc
atcttggacccgcacaccatcaaaatgaaatacttgaagagctggttccttgtggatttc
atatcctccatccctgtggattacatattcctcattgtggacctggagacccaggtggac
tcggaggtatataagacggcccgggctctcaggattgtgcgtttcacaaaaattctcagc
cttctcaggctactacggctttccagattgatacggtacatccaccaatgggaagagatt
ttccacatgacctatgacctggcgagtgcagtggtgagaatcgtcaatctgattggtatg
atgctgttgctttgtcactgggatggctgcctgcagttcctggttcctatgcttcaagac
ttccccgaggactgttgggtctccatcaaccacatggtgaatgattcgtggggtaagcag
tattctcacgctcttttcaaagccatgagccacatgctgtgtattggatatggggcccag
gcccctgagggaatgactgatgtctggctgaccatgctcagtatgatcgtcggagccacc
tgctatgcaatgttcattggacacgccacagccctcatccaatccctggactcctcgcgg
cgacagtaccaggagaagtacaaacaagtggagcagtacatgtcattccataagctgcca
gctgacatgcggcagagaattcatgagtactatgagcatcgctaccagggtaagatgttc
gatgaggagaacatcttgggagagctgagcgagcccctacgagaggaaataattaatttt
aactgccgaaacctggtggccaacatgcctctcttcgccaatgcggatcccaactttgtg
acagccatgttgaccaagctgaggttcgaggtgttccaaccggcagactacatcatcagg
gaaggcacagtgggcaagaaaatgtacttcatccaacatggggttgtgagcatccttact
aaggggaacaaggaaaccaaactctctgatgggtcttattttggagaaatttgcctgttg
acccgtgggaggaggacggctagtgtgagatcagacacgtactgtcggctgtactccctc
tctgtggataacttcaatgaggttctggaagagtatcctatgatgcggagagcctttgag
actgtggccctggaccgcctggacagaataggtaagaaaaactccattctcctccgcaaa
ggggcagagaatcagaacgcgggatctgggaacaatcgggacaatgagatcatacagcaa
attgtaaaacatgacagagatatggctcacactgtgcaggacctccagcacatgggaaca
accagagaactggcttccaaacaggtcatatgggagccactggtccatgcaccactgcag
acagcagcagcaaccactaatgttgccatagcgctcactcaccagcatgggatgtcaacc
accatctacctgccaccatcgtcaatatgtagcccattatcacctgaagtagcccagctg
agtaggcaacctagaaggtcacaacctagtctacatgggtccaggccatcttcagttagt
tccccttcaggagtgctttcccacatgcagacgcctactgctggatccccaatgtcacct
ttggtccagagtcagcaggttgctgatagtgttcaacagggccgacttagtttgggaggc
ccacctcaacaataccttcagagcttggctggaggatcattaactggccttattgaggaa
cagtctttggccaaaaagcctacgacaggatcatcccaaactcagctctcacattccaga
gctgcctccatctcaacatctgtcttgcaacagcctgccagcgtctctgtcactagccca
gagcagagccccatgtctggaaggactttgcattacagtttctccaaagccatgggctct
cacagctctcttccgatgcaccaggcctcaagcacgccccaacagctagtcaaacacaaa
agcatccagggactgccgattgggaagctgactcaagacgtcaggctgctttcagcctcg
caaccagccttgcccaacaaaggggcacagcagctcaaccgaagcccttctcagtacgct
aggaagtcagctggaaacatcactcatttgtcttcttctgtcccagggctgcttgccaaa
ccttccattggtagcacagggcagatcgtgcatccacagccaacctcctccggacctgtg
gttccacctagaagaccttcttctggagctcagaccccacaggcctcagcctcaacgccc
aaagacttacctacgcctaaaaaaggatccgtagcctttagccccgacctagaacctgga
agacccaaacttccatcaaacatgtga
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integrated database retrieval system
