Latimeria chalumnae (coelacanth): 102345222
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Entry
102345222 CDS
T02913
Symbol
THBS4
Name
(RefSeq) thrombospondin 4
KO
K04659
thrombospondin 2/3/4/5
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04145
Phagosome
lcm04510
Focal adhesion
lcm04512
ECM-receptor interaction
lcm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102345222 (THBS4)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102345222 (THBS4)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102345222 (THBS4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102345222 (THBS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102345222 (THBS4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102345222 (THBS4)
00536 Glycosaminoglycan binding proteins [BR:
lcm00536
]
102345222 (THBS4)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Phagocytosis
Opsonins
102345222 (THBS4)
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102345222 (THBS4)
Exosomal proteins of colorectal cancer cells
102345222 (THBS4)
Exosomal proteins of bladder cancer cells
102345222 (THBS4)
Glycosaminoglycan binding proteins [BR:
lcm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102345222 (THBS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
cEGF
Motif
Other DBs
NCBI-GeneID:
102345222
NCBI-ProteinID:
XP_014344887
Ensembl:
ENSLACG00000015371
LinkDB
All DBs
Position
Un
AA seq
967 aa
AA seq
DB search
MMTKRKTLLLVLQLILKLYPGFCIDSEAHVLDLIALPESITELVQEGLGDSSINEVYILS
TFKIPPRTTTALFGLYSATDNAKYIEFSALGRVNKATLRYLRNDGRLSVASFNNAQMADG
KHHSILLRLRGMQQGSTTAELYLDCTLVDTVRNLPAAFTRLPQSASSVELRTFQKRSQDS
LDELKLVLGGSLTQVAAMQDCQLQQSDSAHNVVFGGAAAISGDVGKLLAVQLTQLNQVLA
EVKEMLRQQVKETSFLRNTIAECQACGLGSSISIDNETRPPPPTQPPRPRCGTNSCFSGV
KCTETANGIQCGPCPMGYTGNGITCTDVDECQVNPCFRGVRCVNTVPGFRCESCPVGYIG
PIVQGAGINYAKANKQVCSDLDECSSGRNGGCVSNSQCINTLGSVSCSPKQQNHSWTTRC
KHERHKQSEMQHSLCKKKCSVCLHXTGDLCLSFXQCGIGWAGDGYVCGKDTDIDGYPDEE
LKCLSKNCRKDNCIYIPNSGQEDADGDGRGNACDDDADGDSILNEQDNCILVPNIDQKNT
DQDDFGDACDNCRNAINNDQRDTDNDGRGDTCDDDMDGDGIKNFLDNCQRVPNRNQKDRD
NDGVGDVCDSCPDISNPNQSDIDNDLVGDSCDTNQDSDGDGHQDSKDNCPTVINSSQLDS
DKDGLGDECDDDDDNDGIPDIFPPGPDNCRLVPNPGQEDDNADGIGDICESDFDQDTVID
RIDVCPENAEVTLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYT
AFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGI
QLKAVKSKTGPGEHLRNSLWHTGDTTDQVRLLWKDPRNVGWKDKVSYRWFLQHRPQIGYI
RARFYEGSELVADSGVTIDTTMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDFQAFHTQ
QFGSEAI
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaagaggaaaacgttgttacttgttttacagttgattttaaagttgtaccca
ggcttttgtattgactctgaagcccatgttcttgatcttattgcattaccagagagcata
actgaacttgtgcaagaaggacttggtgattcttcaataaatgaggtctacatattatca
acatttaagatcccaccaagaactacaactgctttatttggcctctactctgctacagat
aatgctaaatatattgaattttcagcattagggcgagtgaacaaagccacacttcggtac
ttgcgaaatgatgggagattaagcgtggcctcattcaacaatgcccagatggctgatggg
aagcaccactctatccttttgcgtttgagaggcatgcagcagggatccactacagcagag
ctctaccttgactgcacactggtggatacagttcgaaatctaccggctgcgtttaccagg
ctgccacagagcgcttcctctgttgagttgcggactttccaaaagagatcacaggattca
ctggacgagttgaagctggtactgggaggctccctaacacaggtagcagcaatgcaggac
tgtcagctccagcagagtgactcagctcataatgtagttttcgggggtgctgctgcaata
tcaggtgatgtaggaaagctgttggctgtccaactgacacagctgaaccaagtgctggcg
gaggtgaaagaaatgctgaggcagcaggtaaaagaaaccagctttcttcgaaacacaata
gcagaatgtcaggcctgtggattgggttcatccatttccattgataatgaaacccgccca
cctcctcccactcaaccccctagaccaaggtgtgggacaaattcatgcttcagtggtgta
aaatgtactgaaacagcaaatggaattcagtgtggtccctgtcctatggggtatacagga
aacggaattacgtgcacagatgttgatgagtgccaagtcaatccctgctttagaggagtc
cgatgtgtgaacactgtccctggtttcaggtgtgagagttgtcctgtaggatatataggt
ccaatcgtccagggagcaggaatcaactacgccaaagcaaacaaacaagtctgttccgat
ttggatgaatgcagcagtggaaggaatgggggctgtgtatcgaattcccaatgcataaac
actctgggatctgtgtcctgctccccgaagcagcaaaatcacagctggacaacacgttgt
aaacacgagagacacaaacaaagtgaaatgcagcacagtctatgcaaaaaaaagtgctct
gtgtgtctgcactagacaggtgacttatgcttgtctttctgacagtgtggaattggctgg
gctggcgatggttacgtgtgtgggaaggatacagatattgatggctatcctgatgaagag
ctcaagtgcttatcaaaaaattgcagaaaggataactgtatctacattcctaactctgga
caagaggatgcagatggagatggaagaggaaatgcctgtgatgacgatgcagatggagat
agcattttaaatgaacaggacaactgtatactggttcccaacattgatcaaaagaataca
gatcaagatgactttggcgatgcttgtgataactgccgtaatgcaattaataatgaccag
agggacactgataatgacgggagaggagacacctgtgatgacgacatggatggagatggt
attaaaaacttcctggacaactgtcagagagttccaaaccgaaaccagaaggacagggac
aatgatggtgtgggcgatgtctgtgacagctgccccgatattagcaatcccaaccagtca
gacatcgacaatgaccttgttggagactcctgtgacacaaaccaagacagtgatggtgat
gggcaccaagacagcaaagacaactgccccacagtcattaacagttcccagctggattca
gacaaagatggactgggagacgagtgcgatgatgacgatgataatgatggaatccctgat
atttttccacctggtccagacaactgtaggctggtacccaacccaggacaagaggatgac
aatgctgatggcattggggacatttgtgagagtgattttgaccaagacaccgtgattgac
aggattgatgtttgccctgagaacgcagaggtcactttgacggatttcagagcttatcag
actgttgttctggaccctgagggggatgcccaaattgatccaaactgggtggttctgaac
cagggtatggagatcgtacagaccatgaacagcgatcctggccttgcagttggttatact
gctttcaatggagtcgattttgaaggtaccttccatgtcaacacagtgacagacgatgac
tatgctggctttattttcggatatcaggacagttccagtttctacgtggtcatgtggaag
cagactgaacagacctattggcaagccactccattcagagctgttgctgagcctggcatt
cagcttaaggctgttaaatcaaaaactggtcctggtgaacacctacgaaattccctctgg
cacactggagacaccacagaccaggtgagattgctgtggaaagaccccaggaatgtgggc
tggaaagacaaggtctcatatcgctggttcttacagcacagaccccagattggatacatc
agggcaaggttctacgaaggttcagaactggttgcagattctggtgttactattgatacc
accatgcgaggaggacgacttggtgtcttctgcttctcccaggaaaatattatttggtcc
aacttgaagtatcgctgcaatgacactattcctgaagattttcaagcgtttcacacacag
cagtttggaagtgaagccatttaa
DBGET
integrated database retrieval system
