Latimeria chalumnae (coelacanth): 102345275
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Entry
102345275 CDS
T02913
Symbol
SYF2
Name
(RefSeq) SYF2 pre-mRNA splicing factor
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102345275 (SYF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcm03041
]
102345275 (SYF2)
Spliceosome [BR:
lcm03041
]
Complex B
Other components
Prp19-related factors
102345275 (SYF2)
Complex C
102345275 (SYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
DUF2608
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
102345275
NCBI-ProteinID:
XP_005988809
Ensembl:
ENSLACG00000012064
LinkDB
All DBs
Position
Un
AA seq
226 aa
AA seq
DB search
MEDSSSTSAEQKREDRLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKRARLEW
ELKEDERKKECAAKGEDYERVRLLEVSAEEAEKWERKKKKKNPDPGFSDYAAAQLRQYQR
LTKQIKPDMEQYENQREKWGEEFYPTSNSLMHGTHVPTKEGVDKMVTDLEKQMDKRAKYS
RRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcctcttcgacttctgcagaacagaaaagagaagaccgacttcggaaattc
cgtgagcttcatctcaagcggaatgaagctcgtaaactgaatcaccaggaagttgttgag
gaagacaagagactcaaactgccagcaaactgggaggccaaaagagccaggctggagtgg
gagctcaaggaggatgaaaggaaaaaggagtgtgcagcgaaaggagaagactatgagcga
gtccggttgttggaagtcagcgccgaggaggctgagaagtgggaaagaaagaaaaaaaag
aagaacccagatccaggcttctctgattatgcagctgctcagttacgtcagtatcagaga
ttgacaaagcagattaagccagatatggagcaatatgaaaaccagagagaaaaatgggga
gaggagttttatccaacgtcaaacagtcttatgcatggaacacatgtaccgaccaaggaa
ggcgttgacaagatggtgacagatctagagaagcagatggataagcgagccaaatacagc
agacgacgcccttataacgatgacgcagacatcgactacattaatgaaaggaatgccaag
tttaacaaaaaagccgagcgtttctatggaaaatacacagccgaaatcaagcagaacttg
gagagaggaaccgctgtataa
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integrated database retrieval system