KEGG   Latimeria chalumnae (coelacanth): 102345275
Entry
102345275         CDS       T02913                                 
Symbol
SYF2
Name
(RefSeq) SYF2 pre-mRNA splicing factor
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102345275 (SYF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102345275 (SYF2)
Spliceosome [BR:lcm03041]
 Complex B
  Other components
   Prp19-related factors
    102345275 (SYF2)
 Complex C
    102345275 (SYF2)
SSDB
Motif
Pfam: SYF2 DUF2608 AAR2_1st
Other DBs
NCBI-GeneID: 102345275
NCBI-ProteinID: XP_005988809
Ensembl: ENSLACG00000012064
LinkDB
Position
Un
AA seq 226 aa
MEDSSSTSAEQKREDRLRKFRELHLKRNEARKLNHQEVVEEDKRLKLPANWEAKRARLEW
ELKEDERKKECAAKGEDYERVRLLEVSAEEAEKWERKKKKKNPDPGFSDYAAAQLRQYQR
LTKQIKPDMEQYENQREKWGEEFYPTSNSLMHGTHVPTKEGVDKMVTDLEKQMDKRAKYS
RRRPYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq 681 nt   +upstreamnt  +downstreamnt
atggaggattcctcttcgacttctgcagaacagaaaagagaagaccgacttcggaaattc
cgtgagcttcatctcaagcggaatgaagctcgtaaactgaatcaccaggaagttgttgag
gaagacaagagactcaaactgccagcaaactgggaggccaaaagagccaggctggagtgg
gagctcaaggaggatgaaaggaaaaaggagtgtgcagcgaaaggagaagactatgagcga
gtccggttgttggaagtcagcgccgaggaggctgagaagtgggaaagaaagaaaaaaaag
aagaacccagatccaggcttctctgattatgcagctgctcagttacgtcagtatcagaga
ttgacaaagcagattaagccagatatggagcaatatgaaaaccagagagaaaaatgggga
gaggagttttatccaacgtcaaacagtcttatgcatggaacacatgtaccgaccaaggaa
ggcgttgacaagatggtgacagatctagagaagcagatggataagcgagccaaatacagc
agacgacgcccttataacgatgacgcagacatcgactacattaatgaaaggaatgccaag
tttaacaaaaaagccgagcgtttctatggaaaatacacagccgaaatcaagcagaacttg
gagagaggaaccgctgtataa

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