KEGG   Latimeria chalumnae (coelacanth): 102345288
Entry
102345288         CDS       T02913                                 
Symbol
POLR2D
Name
(RefSeq) RNA polymerase II subunit D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03020  RNA polymerase
lcm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102345288 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102345288 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcm03021]
    102345288 (POLR2D)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102345288 (POLR2D)
Transcription machinery [BR:lcm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102345288 (POLR2D)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102345288 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom Rop
Other DBs
NCBI-GeneID: 102345288
NCBI-ProteinID: XP_005991252
Ensembl: ENSLACG00000017253
UniProt: H3BCJ8
LinkDB
Position
Un
AA seq 142 aa
MAAGGSDARVGDVEEDASQLIFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggctggtgggagcgatgctcgggttggcgatgtggaggaggacgcctcgcagcta
atcttccctaaagagtttgagaatgcagagacattgctgaactcagaagtccacatgctg
ctggaacatcgaaagcagcagaatgaaagtgcagaggatgagcaggagctctcggaggtc
ttcatgaaaaccttgaactacacagctcgcttcagtcgttttaagaaccgagagaccatt
gccagtgtcagaagcttgctgttacagaaaaagctccacaagtttgagctggccagcttg
gcaaatctgtgccctgagacggcggaggaggccaaagcactcattcccagtttggaagga
agatttgaggatgaggaactccaacagattctggatgatattcagaccaagagaagcttc
cagtattaa

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