Latimeria chalumnae (coelacanth): 102345415
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Entry
102345415 CDS
T02913
Symbol
FAM175A
Name
(RefSeq) family with sequence similarity 175 member A
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102345415 (FAM175A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102345415 (FAM175A)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102345415 (FAM175A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MPN_2A_DUB_like
MYO6_lever
DUF3461
Motif
Other DBs
NCBI-GeneID:
102345415
NCBI-ProteinID:
XP_005999429
Ensembl:
ENSLACG00000011445
UniProt:
H3ATM0
LinkDB
All DBs
Position
Un
AA seq
411 aa
AA seq
DB search
MAEIEGESVTAHISGFVLGALNFHHFNSNSDTEGFLLGDVKAEAKNSITDSQMDDVEVIY
TIDIQKYIPCYQLHSFYSSTSEINEQALNKILSSHKKSVIGWYKFRRNTAQTMTFRERVL
HKNLQKYFSDPELVFLLLTTSVTTETSSTHRLEYALYKPKENLLHRAPLVVTNLGMSEQQ
DYKTFSGSSISSAFNRAVKKHRSDFFNGDGTLKEVNRINEVYSTLQEELKGICIKVEDSE
RSVENLLADVDKLKRKVAERKQQQAQNSDEKQADHLETEENVLLCQALQTFFPASKLFHS
RAVSLTGWHIPKYCCNTDHRINIMDQLTLILEETDFTETTRQAGKRKAKSQQDVDTSLKK
RRSLNLRNRVAKNEDNNGSNKEKVVALSGVESEDDLFDPEEDAGYSQSPTF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggagattgaaggggagtcagttactgcccacatctcaggatttgttctgggagct
ttaaatttccatcacttcaactccaattccgatactgaaggattcctacttggtgatgtt
aaagctgaagcgaagaatagtattactgactctcagatggatgatgtagaggtcatttat
acaatagacatccagaaatatattccatgttaccagctccacagcttttatagttctaca
agtgaaataaatgagcaggccctcaataagatactgtcaagtcacaaaaagagcgtgatt
ggttggtataaatttcggcgtaatacggctcaaacaatgacgtttcgagagcgtgtcctt
cacaagaacttgcagaaatacttctctgatcctgagcttgttttcttgttattaacgacc
agtgtaaccacagagaccagttccacacacagactggaatatgcattgtataagcctaaa
gaaaatctgcttcacagagctcctttagtggtgactaatctaggaatgtcggaacagcag
gactacaagactttttccggatcctccatctcttctgcttttaacagggctgtgaagaaa
cacaggtctgacttttttaatggagatgggacattaaaagaagttaacagaataaatgaa
gtgtattctactctgcaggaggagctgaaggggatatgtataaaagtagaggacagtgag
aggtcagtagaaaatcttctagctgacgtggacaaattgaaaaggaaagtggcagaaaga
aaacagcagcaggcacaaaattcagatgagaagcaggcagaccatttggaaacagaagag
aacgtgcttctgtgtcaggctctccaaacattctttccagcttccaagctctttcactca
cgagctgtctcactgactggatggcacattcctaagtattgctgtaatactgaccatagg
attaacatcatggaccagctcactctgattttagaagagacagactttactgagaccaca
aggcaggcaggcaagcggaaagcaaagtcccagcaggatgtggatacgtcactgaagaag
cgaagatcattaaatcttcggaacagggtggccaaaaacgaggacaacaatggcagtaac
aaagaaaaagtagtagcactgagtggtgtagagagtgaagatgacttgtttgacccagaa
gaagatgctggatattcacagtcacccactttttaa
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