Latimeria chalumnae (coelacanth): 102345460
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Entry
102345460 CDS
T02913
Symbol
HSPD1
Name
(RefSeq) heat shock protein family D (Hsp60) member 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102345460 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102345460 (HSPD1)
03110 Chaperones and folding catalysts [BR:
lcm03110
]
102345460 (HSPD1)
03029 Mitochondrial biogenesis [BR:
lcm03029
]
102345460 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102345460 (HSPD1)
Enzymes [BR:
lcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
102345460 (HSPD1)
Messenger RNA biogenesis [BR:
lcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
102345460 (HSPD1)
Chaperones and folding catalysts [BR:
lcm03110
]
Heat shock proteins
HSP60 / Chaperonin
102345460 (HSPD1)
Mitochondrial biogenesis [BR:
lcm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
102345460 (HSPD1)
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102345460 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
102345460 (HSPD1)
Exosomal proteins of breast cancer cells
102345460 (HSPD1)
Exosomal proteins of colorectal cancer cells
102345460 (HSPD1)
Exosomal proteins of bladder cancer cells
102345460 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
102345460
NCBI-ProteinID:
XP_014340258
Ensembl:
ENSLACG00000015296
LinkDB
All DBs
Position
Un
AA seq
573 aa
AA seq
DB search
MFRLPTVMHQMRPVSRALAPHLTRAYAKDVKFGVDARSLMIQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFEKISKGANPVEIRRGVMLAVDAVINELKKLSKPVTTPEEIAQVATISANGDK
EVGDIISDAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSIQSIVPALEIANTNRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDLAVATGGAVFGDDALGLNLEDVQPHDFGKVGEVIITKDDTMLLKG
KGEKDSIEKRIQEIVEQLEVTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALEKLTPTNDDQKIGIEIIKGTLKIPAMTIA
KNAGVEGSLIVEKIMQSGPEIGYDAMTGEFVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTELPKEEKDPGMGGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtttacctacagttatgcaccagatgaggccagtgtccagagcactggctcct
cacctcaccagggcttatgctaaagatgtgaaatttggggtagatgcaagatccctgatg
atccaaggtgtagacctgctagcagatgctgtagccgttacaatgggaccaaaggggaga
acagtaattatcgaacagagttggggaagtcctaaagtgacaaaagatggtgtgacagtg
gccaaagcaattgatttgaaggacaaatacaagaatattggagcaaaactggtgcaagat
gtggccaacaatacaaatgaggaggctggagatggtaccacaacggcaacagtgctggca
agagccattgctaaggaaggctttgagaaaattagcaaaggagctaatccagttgagatt
aggagaggtgtaatgctggcagtggatgcagtgattaatgagcttaagaaactttccaag
cctgttactactccagaggagattgctcaggttgcaacaatctctgccaatggagacaaa
gaagttggtgacatcatctctgatgctatgaaaaaagttggccgcaaaggtgttatcaca
gtaaaggatgggaagactttgcatgatgaattagaaatcattgaaggaatgaagtttgac
agaggctacatttctccttactttattaatacagctaaaggtcaaaagtgtgaattccag
gatgcttatcttttgctgagtgaaaagaagatctccagcatccagtccattgttcctgca
ttagagattgccaataccaaccgtaaacctctggtgattgtagctgaagatgttgatgga
gaggctctcagtacactggttttaaacaggctgaaagttggtctacaagtagtggcagtg
aaagcaccaggctttggtgacaatagaaaaaaccagctgagggatttggctgttgcaact
ggtggtgcagtctttggagatgatgccctgggcttgaatcttgaagatgttcagcctcat
gactttggcaaagttggtgaggttatcattacaaaggatgacactatgctgttaaagggg
aaaggggaaaaggacagcattgaaaaacgtatccaggaaattgtggaacagctggaggtt
acaactagtgaatatgaaaaggaaaaactgaatgagcggctagccaagctgtcggatgga
gttgcagtactgaaggttggtggtactagtgatgttgaggtaaacgagaagaaagacaga
gttactgatgcactaaatgccactcgggctgctgtagaggagggtattgttcttggaggt
gggtgtgcactgcttcgatgcattccagcacttgaaaagctcaccccaacaaatgatgac
caaaaaattggaattgagattattaaagggacactgaaaatcccagctatgactattgca
aaaaatgctggtgttgagggatcactgatagtagaaaagattatgcagagtggtccagag
attggttatgatgcaatgactggcgagtttgttaatatggttgaaaaaggaatcattgat
cctactaaggttgtaaggactgcgttactggatgctgctggtgttgcttccctcttgtca
acagcggaagctgttgttacagaattaccgaaagaagagaaagatccagggatgggtggc
atgggagggatgggtggtggaatgggaggtggcatgttttaa
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