Latimeria chalumnae (coelacanth): 102345491 Help Entry 102345491         CDS       T02913                                  Symbol COL5A2 Name (RefSeq) collagen type V alpha 2 chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lcm00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     102345491 (COL5A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lcm00536]     102345491 (COL5A2) Glycosaminoglycan binding proteins [BR:lcm00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102345491 (COL5A2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC TILa Motif Other DBs NCBI-GeneID:  102345491 NCBI-ProteinID:  XP_005996582 Ensembl:  ENSLACG00000008343 LinkDB All DBs Position Un AA seq 1445 aa AA seqDB search MVLVPSRTFLIFAVSLAQFLAVKCQDEESGDLGCTQNGQFYTNRDIWKPQPCQICVCDSG TVLCDEIQCEEVLDCARPTIPYGECCPICETDGTVTSRGVKGQKGEPGQVPVVTGIRGRP GPSGPPGSQGYRGDRGPKGRPGPRGPPGFDGEPGIPGQPGEPGPPGHPTHPGYDNQHVAP HMAGGFDDKSGASGQLGLVPGSTGPIGPRGPPGPSGQPGSKGPQGFPGEAGESGPMGPMG VRGPEGPSGKPGEDGESGRPGQPGEPGYPGSVGPRGFPGAPGLPGLKGQRGHAGVEGPKG EVGAAGSKGESGPPGQLGLPGPLGPRGIPGERGRPGSAGVPGKRGPPGLVGKVGDNGPLG LTGSAGFPGAPGDKGEPGPVGARGPEGPQGQRGETGAQGRSGPVGLPGPSGTDGTPGARG ATGSPGATGSPGLLGPPGSPGPQGSTGPPGVKGQLGDPGVPGFKGEAGPKGEPGPIGSQG GIGPPGEEGKRGPRGDSGTIGPLGQPGERGAPGNRGFPGSDGLPGPKGAQGERGLPGSSG PKGNQGDPGRTGEPGLPGARGLTGNPGVQGAEGKPGPLGGPGEDGRPGPPGPIGQRGMPG TMGLPGPKGSSGDPGKPGEQGNAGVPGQRGAPGKDGEIGPLGPPGPAGLAGDRGEQGPPG PIGFQGLPGPPGPPGESGKPGDQGIPGDVGPLGPLGPRGERGIPGERGSSGPPGLQGPKG LPGSHGPDGEKGNPGPPGTPGDVGPPGLQGMPGERGLAGPQGIKGERGVAGEKGAEGTPG NDGARGLPGPVGPPGSAGPAGEKGEPGPRGPIGPFGSRGGPGSRGEPGPTGAVGFAGPPG PDGQPGIKGEHGEPGQKGDAGSPGPQGLAGSPGPPGPPGVPGLKGGRGTQGPPGATGFPG SAGRVGPPGSTGPPGPAGPLGAPGKEGPPGLHGDPGSPGRMGERGPSGPPGSPGDKGDSG EDGQPGPDGPPGPSGTTGQRGIVGLPGQRGERGMPGLPGPAGPPGKQGPTGIPGDKGPPG PGGPPGLNGPTGEPGADGPAGTDGPPGRDGMIGDRGDRGEPGPSGFPGTQGAPGTAGPVG PPGEPGQRGELGSRGPRGPSGTGGKRGLPGPQGPRGDKGEIGDRGDRGQKGHRGFSGLQG LPGPPGPSGEQGRSGLLGPFGPRGPPGPVGPSGKEGYIGPPGPIGPPGTRGTTGDTGPEG PPGEPGPPGPPGSPGPPTAALEDMIAQYDDFIPEPPPEFSEDEALPIGNNKTDPGVHATL KSLSSQIENMRSPDGSKTNPARTCDDLRLCYPRKKSGEYWIDPNQGCVEDAIKVFCNMES GETCISANPSVIPRKTWWATRNPGHLKPIWFGTDINRGSHFAYGDGSQLPSTATTQMTFL RLLSKEASQNITYHCKNSIGYMDDQDGNLKKAVVLKGANDLEIKAEGNNRFKYTVLEDSC TVSSF NT seq 4338 nt NT seq  +upstreamnt  +downstreamnt atggtcttggtgccttcaaggacttttctgatttttgcggtttctttagcacaattttta gctgtgaaatgccaagatgaggaaagtggagatttaggctgtacacagaatggtcaattc tatacaaacagagacatttggaaaccgcagccatgccagatctgtgtctgtgacagtggg acggtcctctgcgatgagattcagtgtgaagaggttttagactgtgcaagacctacaatt ccctatggagagtgctgtccaatttgtgaaaccgatggcactgttacaagtagaggagta aagggacaaaaaggagaacctggacaggtccctgttgtaacaggcataagagggcgtcca ggaccttcaggtcctccaggctcacaagggtaccgaggagaccgtggacctaagggtagg cctggtcctcgtggtcctcctggatttgatggtgaacctggtattccagggcagcctgga gaaccaggaccacctggccaccctactcatcctggctatgacaatcaacatgttgcacct catatggctggaggctttgatgacaagtcaggagctagtgggcagctaggattggtacca ggatcaacgggcccaattggaccaagggggccaccaggtccttctggccagccgggctct aaaggtccccaaggttttccaggggaagcaggcgaatctggaccaatgggtccaatgggt gttcgaggccctgagggaccatctggtaaacctggtgaagatggtgaatctggcaggcca gggcaaccaggtgaacctggatatccaggttctgtgggacctcgaggatttcctggtgct cctggtttaccaggtctgaagggtcaaagggggcatgcaggagtagagggtcctaaaggt gaagtaggagctgctggttcaaagggtgaaagtggtcctcctggtcaattggggcttcca ggtcctttgggcccaaggggaattccaggagaaagagggcgacctggttcagctggtgta cctggtaaacgtgggcctcctggtctagttggtaaagttggagataacggcccacttggt ttaactggatctgcaggttttccaggtgctccaggggataagggtgaacctggtccagta ggtgctcgtggacctgaaggtccccagggacaaaggggtgaaacaggggcccaaggacgt tctggccctgttgggcttccaggtccttctggaacagatgggacacctggtgctagagga gctacaggttctcctggtgctactggttctcctggtcttttaggtccacctggatctcca ggacctcagggaagcactggacctcctggtgtcaaaggacagttgggagaccctggtgtg ccaggttttaaaggagaagcaggccctaaaggtgaacctggtccaattggctcgcaaggt ggaatagggcctccaggtgaagaaggaaaaagaggaccacgtggtgactctgggaccata ggccctcttgggcaacctggtgaaaggggtgctcctggtaaccgaggttttccaggttct gatggtttaccaggtccaaagggtgcccaaggggagcgtggcctgcctggatcttcaggc cctaaaggaaatcaaggtgatcctggacgtactggagaaccaggtctccctggtgcaagg ggccttacaggaaaccctggtgtccaaggagctgaaggaaaacctggaccactaggtggt ccaggagaggatggacgtccaggcccaccaggtccaattgggcaaagaggcatgccagga acaatgggcctacctggtccaaagggcagtagtggtgacccaggaaagccaggagagcag ggaaatgctggtgttcctgggcagagaggtgctcctggcaaagatggtgaaattggccct ctgggtcctccaggtccagctggtttagcaggcgatcgaggtgaacaagggcctccagga ccaataggtttccagggtttacctggacctcctggtcctcctggtgaatctggaaagcca ggtgatcagggaattcctggagatgttggacctttagggccattaggtccaaggggagag cgtggcatcccaggtgagcgaggttcatctggccctcctggtcttcaaggtccaaaaggt cttccagggagccatggtcctgatggtgaaaagggtaatccaggcccaccagggactcct ggggatgtaggtcctccaggacttcagggaatgccaggagagagaggactagctgggccc caaggcattaaaggagaaaggggtgttgctggtgagaaaggtgctgaaggaacgcctggt aatgatggagctaggggtcttccaggccctgttggtccccctggttctgcaggtcctgct ggagaaaagggtgagcctggtcctcgtggtcctattggtccttttgggtcccgtggtggt ccagggtcccgtggtgaacctggtccaactggtgctgttggatttgctggaccaccagga cctgatggtcagcctggtatcaaaggtgaacatggagagcctgggcaaaaaggagatgca ggatctccaggtccacaaggtcttgctggatctcctggcccaccaggtcctcctggtgtt cctggtctaaaaggtggtcgaggtactcagggcccacctggtgctactggttttcctggt tctgctggtagagttggacctcctggttccactggaccaccaggtccagctggtcctctt ggtgctcctggtaaggaaggccctccaggtctgcatggtgatccaggttcaccaggaaga atgggggagcgaggtccatctggtccccctggtagccctggtgataaaggagattctgga gaagatggccaacctggtcctgatggcccaccaggtccctcaggtacaactgggcaaagg ggaattgttgggttgccaggccaacgaggtgaaagaggcatgcctggtcttcctggccca gctggtccacctggtaaacaaggtcctactggtattcccggtgataaaggtcctccaggt cctgggggtcctcctggcttgaatggcccaaccggtgaacctggtgcagatggtcctgct ggtactgatggccctcctggtcgtgatggaatgattggagaccgaggtgatcgtggtgaa cctggaccttcaggttttcctggtacccaaggtgctcctggaactgctggtcctgttggc cctcctggtgaaccaggtcaaagaggggaactaggttcacggggtccaaggggtccttct ggcacaggagggaagcgtggtttacctggacctcaaggtcctcgaggggataaaggagaa ataggagaccgaggtgacagaggtcagaagggtcatagaggtttctcaggactacagggt cttcctggtcctccgggtccttctggtgagcaaggccgttctggacttcttggtccattt ggaccaagaggcccccctggaccagtaggtccttctggcaaagaaggatatattgggccc cctggacctattggaccacctggtacacgaggtacaactggagacacaggccctgagggt ccacctggtgaacctggtcctcctggtcctcctggttctcctggtcctcctactgctgct cttgaagacatgatagctcagtatgatgactttattcctgagccgcctccagagttcagt gaagatgaggcacttcctattggcaacaataaaacagacccaggtgttcatgctaccctc aagtcactcagcagccagattgaaaatatgcgtagccctgatggttccaaaacaaaccca gctagaacctgtgatgatctgagactctgttatccaagaaagaaaagtggggaatactgg attgatcctaaccaaggttgtgtggaagatgcaattaaagtgttttgcaatatggagagt ggtgaaacgtgtatttctgccaacccatctgtcataccacgcaaaacctggtgggccact agaaaccctggtcatttaaaacctatctggtttggcactgacataaatagaggctcccat tttgcatatggtgatggaagtcagttaccaagtacagccaccacgcaaatgaccttccta cgtcttctctcaaaggaagcttcccaaaacattacttaccattgtaaaaacagcataggg tacatggatgatcaagacggcaacctgaaaaaggctgtagtcctcaaaggagctaatgat cttgaaattaaagcagaaggaaacaatagattcaaatacactgtccttgaagacagctgc actgtaagttctttttga

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