Latimeria chalumnae (coelacanth): 102345610
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Entry
102345610 CDS
T02913
Symbol
CACNA1B
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04010
MAPK signaling pathway
lcm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102345610 (CACNA1B)
04020 Calcium signaling pathway
102345610 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102345610 (CACNA1B)
Ion channels [BR:
lcm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102345610 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102345610
NCBI-ProteinID:
XP_014342042
Ensembl:
ENSLACG00000004740
LinkDB
All DBs
Position
Un
AA seq
2342 aa
AA seq
DB search
MARFGDDLPARYGGGGPAGGGRGSSRQGGPQSGQRMYKQSMAQRARTMAIYNPIPVKQNC
LTVNRSLFIFSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDEDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATVGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYIGK
FHNACFSQTGEQVGDYPCGKEPPARLCPNETTCRGYWPGPNFGITNFDNILFAVLTVFQC
ITMEGWTDILYNTNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRR
AFLKLRRQQQIERELNGYLEWICKAEEVMLAEEDKNAEEKSPLDVLKRATTIKKSKNDLI
HAEEGEDHFTDISSVGSPFARASLKSGKNESSSYFRRKEKRFRFFIRRMVKAQSFYWIVL
CIVALNTLCVAIVHYDQPQWLTDALYFAEFVFLGLFLTEMFLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTGEDWNAVM
YHGIESQGGVRSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEAT
NQKLARQKAMEVAEVSPISAANISIAAXQQKSLKSMSVWEQRTNQIRLQNLRASCEALYN
ELDPEERMRIASSLHIRPDMNTHLDRPLVVEKPKGDVRNNVGKTGPADGQDSEQDRLVQP
GSSEAPRKHHRHRDKLNEQEKAVETNENGESGTNDKEEKRRQHQSRSKEMEGKSEGKEGK
SERSRSREGGKKHHHQGVGPVEERSEKEPKQCRSHRHSTERQGKEGNGTVNGTKTERRSR
HRGGSRSGNREGDPRGENGDEHPRRQKSRRKALSTYVAEDKKENGDHKNGETGEKEHKNH
RPNQPANDMGTKGLTAAPPPPTGCLKQGAEQPEDADNQKNVKRMTQPVAKTTTANIPVTI
TAPPGETIVIPMNNIDFESSTKKEEKKELEDDLTRNGPRQILPYSSMFVFSPTNPIRKLC
HYIVSLRYFEMCILLVIAMSSIALAAEDPVQADSPWNNVLKYLDYVFTGVFTFEMVIKMI
DLGLLLHPGSYFRDLWNILDFVVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIK
RLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKELERDCR
GKYLEYEKDEVEARPREWQKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEDQG
PSPGFRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSDCSLEKNERACIDFA
ISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMAMIALNTIVLMMKFYDAPRVYEDML
KCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNIFDFVTVLGSITDILVTEIADMNNFIN
LSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGN
IALDDETSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNKPCDPRSGTSANECGN
DFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAAC
GRITYTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPIAEDNSVHFTSTLMALIRTA
LEIKLASGGPNQQQCDAELKKEIATVWPNLSQKTLDLLVPPHRPNELTVGKVYAVLMIFD
YYKQNKTKKIQQQQQQQGHPQTRTTQLFQRLVTPTQEQLALLQFNNTKTVMPQQSTTSLN
NGGNLTIQDIGVRDPTSCVSQLPQEVFHDSTKKAIERGHSEEIPSRQAVEMKEICPSTTN
GDHQPALESQGRAASMPRLAVETQRSKARSPGSYQAPIPDTSPMKRSISSLTPQRPQGML
LHDYALEPAVPERPHHHHNHRCHRRREKKQRSLERSPSRHADRDTGQVSDLITMAPGDAS
SRERKHERGRSQERKHHSSSAEKQRYYSCDRYSSRDHGQPKSVIQSRSTSPNGGQDPGHP
RQGSGSVNGSPATSTSGTSTPTGRGRRQLPQTPLTPRPNITFKTANSSPVQFASAHSGLP
TFSPRRLSRGLSEHNALLRYESENHSHIMVTRIGSDPYLGHREDCDSSYHILLEDTLTFE
EAVATNSGRSSRTSYVSSLTSQPHHTHRIPNGYHYSLGVSMGPGTGTREHQYYHEADEDD
WC
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggctcgatttggagatgatctaccagctcgctatggaggtggaggaccagcgggtgga
ggcagaggcagcagccgccaaggtggccctcagtctgggcagaggatgtacaagcagtcg
atggctcagagagccagaactatggctatttacaaccccatccctgtcaaacaaaactgt
cttacagtcaacagatccctcttcatcttcagtgaagacaatatcatacgaaaatatgct
aaaagaataactgaatggcctccatttgaatacatgattttagctactatcatagccaac
tgcattgttttggctttggaacaacatttacctgatgaagacaagacacccatgtctgag
agactggatgatactgaaccatactttattggaatattttgttttgaagctggtataaaa
atcattgcccttggatttgtttttcataaaggctcctaccttcggaatggctggaatgtg
atggattttgttgtagttctgacagggatcttagccactgttgggacggattttgatcta
cggactttacgagcagttcgggtattacggccactaaaactcgtatcaggaattccgagt
ttgcaggttgttctcaagtcgattatgaaggccatggtacctttgctacagattggcctg
ctgctcttcttcgctattgtgatgtttgcaatcattggtctggaattctatatagggaaa
tttcacaatgcctgcttcagtcaaacgggtgagcaggttggagactatccatgtggaaaa
gagcccccagcaaggctgtgtccaaatgaaacaacatgccggggatattggcctggtcct
aactttggaatcactaactttgataatatcctgtttgctgtgctcacagtcttccagtgt
attaccatggagggatggacagacatcctttacaatacaaatgatgcctcagggaacaca
tggaactggctctacttcatccctcttatcatcattggctccttcttcatgctgaacctg
gtactgggtgtcctttctggggagtttgctaaagaacgagagagagtggaaaacagacgt
gcatttttaaaattacgaagacaacagcagattgagagagaactcaatggatacttagaa
tggatttgcaaagctgaggaagtcatgttggctgaagaagataagaatgctgaagagaaa
tctcctttggatgttttgaaaagagccacaacaataaagaagagtaaaaatgacctgatc
catgcagaagagggagaagatcatttcacggacatttcttcagtaggatccccatttgct
agggccagcctgaaaagcggaaagaatgagagctcgtcctactttcggagaaaagagaag
aggtttcgttttttcatccggcgaatggtgaaggcccagagcttctactggattgtcctc
tgtattgttgctctcaacactctctgtgttgccatagtacattatgaccagccacagtgg
ctcacagatgccttgtactttgcagaatttgttttccttggactgtttctaacagagatg
ttcctgaagatgtatggcttgggaccccggaattacttccactcctctttcaactgcttt
gactttggggtgattgtgggcagcattttcgaggtgatttgggctgctgtcaagcctggg
gcttcatttggcatcagtgtgttacgagcacttcgactactgaggatattcaaagtaaca
aagtattggaactcccttcgcaatctggtggtgtctctcctgaactctatgaagtccatc
atcagtttgttgtttctccttttcttgttcatcgttgtctttgccctactggggatgcag
ctcttcggtggacaatttaattttgaagatgaaacaccaacgacaaactttgacaccttc
cctgctgcaattctaactgtgtttcagattttgacaggtgaagactggaatgctgtgatg
taccatgggattgagtcacaaggaggcgtgagaagcggaatgttctcctccatttatttt
attgtactgactttatttggtaactataccctcctgaatgtcttcttagccattgctgtt
gacaatctcgcaaatgcacaggaattgacaaaggatgaagaagaaatggaagaagccacc
aatcagaaacttgccagacaaaaagccatggaggtcgcagaagtcagtcccatatctgct
gcaaacatatctatagctgcgtaacaacagaagtctttgaagtcaatgtcagtttgggag
cagagaacaaaccagattcgactccagaacttgagagccagctgtgaggctctgtacaat
gagcttgatcctgaggaacgcatgcgcattgcctcatcgctacacatccgaccagacatg
aacactcacttagatcgaccattagttgtagagaagccaaagggtgatgtgaggaacaat
gttgggaagacaggtccagcagatggacaagacagcgagcaagacaggcttgtccagcca
ggcagtagtgaggcaccaagaaagcatcaccgacatcgggacaaattgaatgagcaagaa
aaagctgtagagaccaatgaaaatggagaatcaggtaccaatgacaaagaggagaaacgc
cggcagcaccagagtcgtagtaaagaaatggaaggaaaaagtgaggggaaagaggggaaa
agtgaacggagtaggagcagggagggtggaaagaagcaccatcaccagggggtgggtcca
gtggaagagagatccgagaaggaacccaagcagtgccggtcacaccgacattccacagaa
cggcaaggcaaggaaggaaatggtaccgtcaatggcacaaagactgagcgccggtcaaga
caccgaggtgggtcaagatctggaaaccgagaaggcgatccaagaggtgaaaatggggat
gagcatccaagacgacaaaaatctcggcgcaaggcattgtcaacctatgttgcagaggat
aaaaaagaaaatggggaccacaagaatggagaaacaggggaaaaggagcacaaaaatcat
cggcccaaccagcctgcaaacgatatgggaaccaaagggctcacagcagctccaccgccc
cctactggctgcctgaagcagggggctgaacagcctgaagatgctgataatcagaaaaat
gtgaagcgcatgacacaacccgtggctaagactaccacagccaacatccctgtaaccatc
acagcaccccctggagagactattgtcatacccatgaataacattgactttgaaagttca
actaaaaaagaagagaaaaaggagttggaagatgacctgacaagaaacggaccccgccag
atcctgccttacagctccatgtttgttttcagtcctacgaaccccatccgcaaactgtgt
cactacattgtaagcctgcggtattttgagatgtgcatcctgctagtgatagcaatgagc
agtattgcattagcagcagaggatcctgttcaggcagactcgccatggaataatgtctta
aagtacttagactatgtgtttactggagtctttacatttgaaatggtgataaagatgatt
gatttaggcctgttgctgcacccgggttcctacttccgtgacctgtggaacattctggat
ttcgttgtggtcagtggtgcactggtagcattcgccttctcaggaaccaaaggaaaggat
attaatacaatcaagtctttacgagttctccgggtcctcagaccactgaagaccattaag
cggttgccaaagttaaaggcggtgtttgactgtgtggtgaactctctgaagaacgttctc
aacatcctgatcgtttacatgctgttcatgttcatctttgcagtggtggctgtgcagctc
ttcaagggtaaattcttctactgcacagatgagtccaaggagttggagagagactgcagg
gggaagtatctggagtacgagaaggatgaagtggaagctcggccccgagagtggcagaaa
tatgaatttcactatgacaatgttctctgggccctgcttactctttttactgtctccact
ggagagggctggccaactgtcctaaagcactccgtagatgctacatatgaggaccagggt
cccagtcctggctttcgaatggagatgtccatcttctatgtggtctactttgtcgtcttc
ccttttttctttgtaaatatttttgtggcgttaattattattactttccaggagcaagga
gacaaagtgatgtcagactgtagcctggagaaaaatgagagagcttgtatagactttgcc
ataagtgctaaaccattgactcgctacatgccacaaaacaagcagtcatttcagtacaag
atgtggaaattcgtggtctcacctccttttgagtattttatcatggccatgattgctctc
aataccattgttctgatgatgaagttttatgatgctccacgtgtttatgaagatatgtta
aagtgtctaaatatcgtgttcacatcaatgttttcgatggagtgtgtgttaaagattatt
gcctttggtgtgctgaattacttcagggatgcgtggaatatctttgattttgtgacagtg
ctgggaagtataactgatattttagttacagaaatagcggacatgaacaacttcatcaac
ctcagttttttgcgactgttccgagcagcacgactcataaaactcctccgccaaggttac
accattcgcattctgctgtggacgtttgtccagtcctttaaggcacttccatatgtctgt
ctcctgattgcaatgctgtttttcatctatgctattattggaatgcaggtgtttgggaac
atcgctctcgatgatgaaacctccatcaatcgccacaataacttcaggacattcctgcag
gcactcatgttgcttttcaggagtgccactggagaggcctggcatgagatcatgctgtct
tgcttgggtaacaagccttgtgatccccgctctggtacttctgcaaatgaatgtggaaat
gattttgcctatttttactttgtttccttcatctttctctgctcctttctgatgttgaat
ctctttgttgctgtaattatggataactttgagtacctgacacgagattcctctatcctg
ggaccccatcacctggatgagtttatacgagtctgggctgaatatgatccagcagcctgt
gggcgcatcacttacactgacatgtatgagatgctccgacacatgtctccgcccctcggc
ctggggaagaaatgcccggcgcgagtcgcctataagcgtcttgtgagaatgaacatgcca
atagcagaggacaactcggtgcatttcacttccaccttgatggctttgatccggacagca
ctggaaatcaaactcgcttcaggtgggccaaaccagcagcagtgtgatgcagagttgaag
aaagaaattgctactgtgtggcctaatttgtcccaaaaaacgctggatttgctggtgcca
ccacacagaccaaacgaactgacagtggggaaagtatatgcagttctgatgatatttgac
tactacaagcagaataaaactaaaaaaattcagcaacagcagcagcagcagggccatcca
cagacccgaacaacacagttgtttcagcgcttggtgacgccaacacaggaacagttagca
cttctgcagttcaacaacaccaaaacagtgatgccacagcagagcactacctctctcaac
aatggggggaacctgacaatccaagatattggggttagggaccccacttcctgtgtgtct
cagcttccacaggaagtatttcatgacagtacaaagaaagccatagagagaggtcactca
gaggaaattcccagcagacaggctgtggaaatgaaagagatttgtcccagcaccaccaat
ggagatcatcagccagccctggagagccaggggagagcagcatcgatgccccgccttgct
gtggagacccagaggagcaaggcacgatcaccggggagttaccaagcacctattcctgac
acaagccccatgaagcggtccatctccagtctcacaccacagcgcccccaggggatgctc
ctgcatgactatgctctggagcctgcagtgccagagcggccacatcaccaccataaccat
cgctgtcatcgcagaagggaaaagaaacagagatccctggaaaggtcacctagtagacat
gctgacagagacacaggtcaggtgagtgacctcatcaccatggctccaggggatgcttca
tcccgggagcggaagcacgaacggggacggtcacaagagcgaaagcatcattcctcttca
gctgagaagcagcgatattactcctgtgaccgttacagcagtcgggaccatggccagcct
aaatcagttattcagagtcgctccacatcccctaatgggggccaagatcctggtcatccc
agacagggcagtggttcagttaatgggagccccgcaacctcaacatctggcactagcacc
ccaactggccgtggccggagacagctcccccaaacgcctctcactccccgcccgaacatc
accttcaagactgccaactcgtcacctgtccagtttgccagtgctcacagtggcttgcca
actttctccccccggcgcctgagtcgcggcttgtctgaacataatgctttgctccgctac
gagtcagaaaaccactcgcacattatggtgacccgcattggctccgacccttatctggga
caccgagaggactgcgatagcagttatcacattctactcgaagacaccttgacctttgaa
gaagctgttgccactaattctggaagatcctcaaggacttcttatgtctcatccttaaca
tcacaacctcaccacacacataggatcccgaacggctaccactattccctgggagtcagc
atgggccccgggacaggtaccagagagcatcaatattatcatgaagcagatgaggatgac
tggtgctag
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integrated database retrieval system
