KEGG   Latimeria chalumnae (coelacanth): 102345845
Entry
102345845         CDS       T02913                                 
Symbol
TRA2A
Name
(RefSeq) transformer 2 alpha homolog
  KO
K12897  transformer-2 protein
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102345845 (TRA2A)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcm01009]
    102345845 (TRA2A)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102345845 (TRA2A)
Protein phosphatases and associated proteins [BR:lcm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102345845 (TRA2A)
Spliceosome [BR:lcm03041]
 Common components
  Common spliceosomal components
   SR proteins
    102345845 (TRA2A)
SSDB
Motif
Pfam: RRM_1 FMP27-BLTP2_C RRM_3
Other DBs
NCBI-GeneID: 102345845
NCBI-ProteinID: XP_005997166
Ensembl: ENSLACG00000014765
UniProt: H3B4D7
LinkDB
Position
Un
AA seq 289 aa
MSDVEENTFEGRESRSQSKSPAGSTARVKSESRSGSRSPSRNSKRSESRSRSRSKSRSRS
RRHSHRRYTRSRSRSRSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSREVPWKKSR
DQRGRGDQANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAF
VYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHGGGGGGGGGR
RRESYYDRGYDRYDRYDEYDYRYRRRSPSPYYSRYRSRSRSRSYSPRRY
NT seq 870 nt   +upstreamnt  +downstreamnt
atgagcgacgtcgaggagaatacatttgaaggaagagagtcccgctcccagtcgaaatcc
ccagcaggaagtactgctcgtgtcaagtcggagagtagatctggatcacgtagtccttca
aggaactccaaacgctctgaatcccggtctagatcaagatcaaagtccaggtcgcgttcc
agaagacattctcacaggcgatatacacgttccagatctcgttctcgttcacacagaagg
cgatcccgaagccgatcgtacacccctgagtatcgccgacggaggagccgtagtcactct
ccaatgtcaaatcgaaggaggcacactggaagcagagaagttccatggaaaaagtcaaga
gatcaaagaggcaggggagaccaggctaacccagatccaaacacatgtcttggagtgttc
gggctgagtttatacaccacagagagggatcttcgtgaagttttctcccgttatggtcct
ttggcaggtgtcaacgtggtatatgaccagaggactggtcgttcaagaggatttgcattt
gtttattttgaaagaatagatgattccaaagaggcaatggaacgagctaatggcatggaa
ctggatggaaggagaattcgtgtggactactcaatcaccaagagagcacacactcctact
cctggtatttacatgggcagacccactcatggtggtggtggtggtggtggtggaggccgt
cgtcgtgaatcttactatgaccgagggtatgatagatatgaccgatacgatgaatacgat
tacagatacaggagacgatccccttcaccatattacagtagatataggtctcgttcaagg
tcccgttcatacagcccaagacgctattga

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