Latimeria chalumnae (coelacanth): 102345911
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Entry
102345911 CDS
T02913
Name
(RefSeq) transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102345911
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102345911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102345911
NCBI-ProteinID:
XP_005990387
Ensembl:
ENSLACG00000006644
UniProt:
H3ACX2
LinkDB
All DBs
Position
Un
AA seq
304 aa
AA seq
DB search
MYSIIETEIKSPVSQSHGTTSNSTPGSNGKNNCDQDRVKRPMNAFMVWSRGQRRKMAQEN
PKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKD
KYSLPNGLITPGTNPINSSVGVGQRMDTYAHMNGWSNGAYSLMQDQLGYAQHPGMNSPQI
QQMHRYEMAGLQYSPMISTTQSYMSPVSTYSISPTYSQQTTTGMSLNSMGSVVKSEPSSP
PPALTSQSQRACLGDLRDMISMYLPPGGDATDHPSFQTNRLHSIHQHYQSTGAGVNGTIP
LTHI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtataattgaaaccgagattaaaagtcctgtttctcagtcacacgggaccaca
agcaattcaacaccaggcagtaatggaaaaaataattgtgatcaagaccgagtgaaaaga
ccaatgaatgccttcatggtttggtctaggggtcagagaaggaagatggcccaagaaaat
ccgaaaatgcacaactcggagatcagtaagaggcttggagcagattggaagcttctaaca
gatgccgaaaaaaggccattcattgatgaagcaaaaagattgagagctgtgcatatgaag
gagtatccggattataaatacaggcccagaagaaagacgaaaacgctcctgaagaaggac
aaatattccttaccaaatggcctcataactccgggaacaaatccaatcaacagtagtgtt
ggagttggccagagaatggacacttatgcccacatgaatgggtggtctaacggggcatat
tctctgatgcaagaccagcttgggtatgcacagcatccgggcatgaacagcccacaaatc
caacaaatgcaccgatatgagatggccggccttcagtatagcccaatgatctctactacc
caaagttacatgagcccagtttctacttacagtatctcaccaacttacagtcaacagaca
accacggggatgagtctaaattccatgggatctgttgtcaagtcggagccaagctctcct
cctccagctctaacttctcagtctcagagagcttgtctgggtgatcttcgagatatgata
agcatgtatcttcctcctggtggagatgccacggatcatccgtccttccaaacgaataga
ctgcacagtatccaccaacattatcaaagtactggagctggggttaatgggacaatacct
cttacccacatttga
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