Latimeria chalumnae (coelacanth): 102346021
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Entry
102346021 CDS
T02913
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102346021 (ZEB1)
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
102346021 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_6
zf-C2H2_15
zf-C2HE
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
102346021
NCBI-ProteinID:
XP_005994737
Ensembl:
ENSLACG00000013253
LinkDB
All DBs
Position
Un
AA seq
1096 aa
AA seq
DB search
MADGGWEYYYSRGESATLVEVTNYNNVVETNSDSDDEDKLHIVEEENVTEAVDCDASVPE
DDLPTDHEVLPEDKETEENAEDCWGDEGVKEGDEILGPEAQADGTVCPENEEDCESDAEN
EQNHDPNVEEFLQQEDTAIIYPEAPEEDHRQDTPEASGQDENGTPDAFSQLLTCPYCDRG
YKRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGREQRHVTQSGGNR
KFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPV
NGRARPGVKTSQCPSPALSASPSSPARTQIRQKIENKPLQEQLPVNQIKTEPVDYEYKPI
VVTSGINCATPLPNGVFSSASPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKV
AVDGNVIRQVLENNHPNIASKEQETINSVSIQQGGHSLISAISLPLVDQDGTTKIIINYS
LEQPSQFQTVPQNLKKENANHVDSCKNEKSPEDLTVKAEKDKNSEEENSVNTCLLCDDSP
GDLNALHDLKHYNLKTNAPVQFTLLGAADNEKLDVPISSVVDGNLSPGQPPLKNLLSLLK
AYYALNAQPSAEELSKIADSVNLPLEVVKKWFEKMQAGQISVQSSGSSSPALNINGTPPD
QNHISSVSENELPDITSSSQSPSGLTKSQIMQTQQIVMNGSRSNTPPPPPLNLSSSKSSQ
DCLSTAESVKEEPQLEPLDLSLPKQQKELLGRSTVNSVYQNSVYSVQEEPLNLSCTKKEA
TQQDCISDDPNPVIDAAPLSANPINITIPAVAAQLPTILAITNQSNVPCLRALAANKQTI
LIPQVTYAYPSAASPAGLEPQQNQTQVNVNQEERQDTSSEGVSTVEDQNDLDSTPPKKKM
RKTDNGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECTICKKAFKHKHHLIEHMRLHSG
EKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDGTEQDETGQEVLNAENMDARAS
PSHIDSDERESITREGDESEKEEDEKETEEILEDRESEVAQEEEKVVGDTVEEEKPKEQI
DSTDQESIENGDQNEV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgggggatgggagtactattattctagaggtgaaagtgcaaccttggtagaa
gttacaaattacaacaatgtagtggaaacaaactctgattcagatgatgaagacaagttg
catattgtggaagaggaaaatgtgaccgaagcagtagattgtgatgccagtgtgccagag
gatgacttgccaacagaccatgaagtattaccagaagacaaagaaacagaggaaaatgca
gaagactgctggggagatgaaggtgtaaaagaaggggatgaaatcctggggcctgaagct
caggcagatgggacagtttgtccagaaaacgaagaggactgcgaatcagatgccgaaaat
gaacaaaaccatgaccctaatgttgaagaatttcttcagcaagaagatacagctataatt
taccctgaagcaccagaagaagaccatagacaagatacacctgaagctagtggtcaggat
gaaaatggaacaccagatgcattttcccagcttcttacatgcccatattgtgatcgaggt
tacaagcgcttcacttctctaaaagaacacattaagtatcgccatgagaaaaatgaagat
aacttcagttgctctctgtgcagttacacatttgcttatagaacacaactagaacgccac
atgacttctcataaatcaggacgagagcaaagacatgttacacagtctggaggtaaccgt
aaattcaagtgcactgaatgtggaaaggcttttaagtacaaacatcaccttaaggagcac
ttgcgaatccacagtggagagaagccatatgaatgcccaaactgcaagaaacgattttcc
cactctggatcatacagttcacatattagcagtaaaaagtgtattggcctgatgcctgta
aatggtagagcacgtccaggggtcaaaacatcacagtgcccatctccagctctttctgct
tctcccagtagcccagcaagaacccagattcgtcaaaagatagagaataagcctttgcaa
gaacaactccctgtaaaccaaatcaaaactgaacctgtggattatgagtacaagcctata
gtggtaacttcaggaatcaactgtgcaactccattaccaaatggggtttttagtagtgct
agcccactgcaggcaaccagttctcctcagggtgttgtgcaggcagtagtcctacccaca
gtaggtcttgtgtcccctatcagtattaacttaagtgatattcaaaatgtgctcaaagtc
gcagtagatggtaatgttataagacaagtactggagaacaatcaccccaacattgcatcc
aaagaacaagaaacaatcaactctgtgtcaattcaacaaggtggccattcccttatttct
gctatcagtcttccattggttgaccaagacggaacaaccaaaatcatcatcaactacagt
cttgagcaacctagtcagtttcagacagtaccacaaaacttgaaaaaggaaaatgctaac
catgtggacagctgtaaaaatgaaaaaagtccagaagaccttacagtcaaagcagagaaa
gacaagaattctgaggaagaaaacagtgttaatacctgtcttctgtgtgatgacagccca
ggtgacctaaatgcacttcatgatcttaagcactataatcttaaaaccaatgcccctgtt
cagtttactcttctcggtgcagcagataatgaaaaattagatgtccccatttcttcagta
gtggatggcaatctgtctcctggccaaccacccttaaagaatcttttgtcccttcttaaa
gcatattatgctttaaatgcacaaccaagtgcagaggagctttccaaaattgcagattca
gtaaacttaccactagaggtggtgaagaagtggtttgaaaaaatgcaggctggacagata
tctgtccagtcctctggatcatcatcccctgctctaaatataaatggcaccccacctgac
cagaatcacatctcctcagtatctgaaaatgagttacctgatatcacaagtagttcccag
agccccagtggactgactaaatcgcaaattatgcaaacgcaacaaatagtaatgaatggc
tctaggagtaacactcctcctccaccaccactaaatctctcttcatctaaaagttcacaa
gattgtttatctacagcagagagtgtaaaagaggagccacagttagaaccgcttgatttg
tcactaccaaagcaacagaaagaactattgggaaggtcaactgttaacagtgtttaccag
aatagtgtttactctgttcaagaagaacccttgaacttgtcttgtacaaagaaggaagca
acacaacaggactgtattagtgatgacccaaatcctgttatagatgcagccccactaagt
gccaaccccattaatattactatacctgcagttgctgcccagttacctacaattcttgcc
atcaccaaccagagcaatgttccatgcttgagagctctggctgccaataagcagaccatt
ttgatccctcaagtgacctatgcttatccatctgcagctagtccagcaggtcttgaacct
cagcaaaaccagacccaagtcaatgtaaatcaggaggaaaggcaagacactagctcagaa
ggagtatcaactgtggaagatcaaaatgatttagactcaacccctcctaagaagaagatg
agaaagactgataatggaatgtatgcttgtgacttgtgcgataagatattccagaaaagt
agctcattactaaggcataagtatgaacacacaggaaaaaggcctcatgagtgtacaatc
tgcaaaaaggcatttaaacataagcatcacttgattgaacacatgcggctgcattctgga
gaaaagccttatcaatgcgacaagtgcggaaaacgattttcacactctggttcctactcc
cagcacatgaaccatcgctactcctactgtaagagagaagcagaagagcgagacggcaca
gagcaagacgagactggacaggaagtgctgaatgctgagaatatggatgcaagggcatcc
ccatctcacattgactcagacgagagagagagtatcacaagagaaggggatgaaagtgaa
aaggaagaagacgagaaggagactgaagaaatccttgaagaccgtgaaagtgaagtagca
caggaggaagagaaagtagtgggggacacagtagaagaagagaagcctaaggagcaaatt
gacagcacagaccaagaaagtatagagaatggtgatcagaatgaagtttaa
DBGET
integrated database retrieval system
