Latimeria chalumnae (coelacanth): 102346117
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Entry
102346117 CDS
T02913
Symbol
LRRC8D
Name
(RefSeq) leucine rich repeat containing 8 family member D
KO
K22038
volume-regulated anion channel
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102346117 (LRRC8D)
Ion channels [BR:
lcm04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
102346117 (LRRC8D)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_R13L1-DRL21
LRR_9
LRR_At5g56370
LRR_5
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
102346117
NCBI-ProteinID:
XP_005997759
Ensembl:
ENSLACG00000012159
UniProt:
H3AVZ2
LinkDB
All DBs
Position
Un
AA seq
848 aa
AA seq
DB search
MFTLTEIASLNDIQPTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKDQVACLPFLDP
ENLHSASPAESSNSPRKEGPEFTTSGNLPSITSNTITTEKDLGRTSHTSNSGRATEKKDQ
KPTGRKTNLEYQQYIFINQMCYHMALPWYSKYFPYLALIHTIILMVSSNFWFKYPKTSSK
IEHFVSILGKCFESPWTTKALSETACEDSEENKQRLTNVASLPKHVSTSSDEGSPSTTTP
MTVKTGITFSAEKPVVEVPSVTILDKKDGEQAKALFEKVRTFRAHVEDSDLIYKLYAVQT
VIKTLKFILILCYTLTFVSDIKFEHKCIPSIVHLTGYAEFQCTHNMAFMLNKLLICYIGL
ISLYGLVCLYTLFWLFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQLYSK
RFGVFLSEVSENKLRQISLNHEWTYEKLRQHVSRNTQENQELHLYMLSGIPDAVFDLTDL
EVLKLELIPEAKIPAKISQMSNLQELHLYHCPAKVEQTAFSFLRDHLRCLHVKFTDVAEI
PNWVYLLKNLRELYLVGNLNAENNKMIALESLRELRHLKILHLKSNLTKVPSNITDVAPH
LTKLVIHNDGTKLVVLNSLKKMMNLAELELLNCELERIPHAIFSLTNLQELDLKSNNIRT
IEEVISFQHLKRLTCLKLWHNKIVTIPPSISHVKNLEWLYLSNNKLESLPAALFNLQKLR
YLELSYNSIAIIPADIGTFQHLQYFAITGNKVETLPKQLFKCTKLRTLNLGQNCITSIPE
SIGQLYQLIQLELKGNCLYRLPAQLGQCKLLKKSGLIVEDHIFDTLPPEVKDVFNQDPTS
GTTFANGI
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctcactgagatagcatcacttaatgatatacagccaacttatcggatacta
aaaccatggtgggatgtatttatggactatttagcagttgttatgctgatggtggccatc
tttgcaggcaccatgcagctaaccaaagatcaggttgcctgtctgccttttttggatcca
gagaatctccatagtgcttcacctgccgagagcagtaacagtccacgcaaagaagggccc
gagtttaccacttcgggaaatcttcctagtataacatctaatactattacaacagaaaag
gatttggggaggacttcgcacacttctaactcaggaagagcgactgaaaaaaaagaccag
aagcccacagggcgtaaaacgaacttagagtatcaacagtatatatttattaatcaaatg
tgctatcatatggcattgccctggtactccaagtactttccttacctagctcttatacat
accatcattcttatggttagtagtaacttttggtttaagtatcctaaaaccagttcaaag
attgaacattttgtttctattttgggaaagtgttttgagtcaccttggactacaaaggca
ttgtcagaaacggcatgtgaagattctgaagagaataaacagcggcttactaatgttgca
tctttgccaaagcatgtgtcaaccagcagtgatgaaggaagtccaagtactactactcca
atgacagtaaaaacgggtattaccttttcagctgaaaaacctgttgttgaagttcctagt
gtgactattttggacaagaaagatggagagcaggctaaagccctttttgaaaaggttcga
acattccgggcccatgtggaggatagtgacttgatatataaactgtatgctgttcagaca
gtgataaaaacactcaagttcatactgattctctgttacaccctcacttttgtgtctgac
atcaagttcgagcacaagtgcatccctagcatagtgcacttgacaggctatgctgaattt
cagtgtacacataatatggcttttatgctaaataaactactgatctgttatattggtctc
ataagtctttatggccttgtttgtttatatactttgttttggctgtttagacgaccatta
aaagagtactcatttgaaaaagttcgtgaagagagtagtttcagtgacattccagatgtt
aaaaatgactttgcatttcttttgcacatggtagatcagtatgaccaactatattcaaaa
aggtttggtgtcttcttatctgaggttagtgaaaacaagcttcgccaaatcagcttgaac
catgaatggacatatgaaaagcttcgacaacatgtttctagaaatacccaagaaaaccag
gagcttcacctctacatgctgtcgggaatccctgatgcagtatttgatttgacagatttg
gaagtactaaaattagagttgattcctgaagctaaaattccagctaaaatttcacaaatg
agtaatctacaagaattgcacctttatcattgtcctgctaaagttgaacagactgcattt
agttttctccgtgatcacctccggtgcctccatgtgaagttcacagatgttgcagaaatc
cctaactgggtctatttgttaaaaaatctgcgcgagttatacttggttggaaatctcaat
gcagagaataataaaatgatagcactggagtctctcagagaattgaggcatctcaaaatt
ctacatttgaagagcaatcttaccaaagttccatcaaatattacagatgtggcacctcat
ttgaccaaactggtaattcacaatgatggaactaagttagtagttcttaacagtcttaag
aaaatgatgaacttagctgaactggagctgttaaactgtgagctagaaagaattccacat
gctattttcagtttaactaatttgcaggagctggacttaaaatcaaataatattcgcaca
attgaagaggtcatcagctttcagcatttgaaaagattaacttgcttaaaattgtggcac
aataaaattgtaaccattcctccatcaatcagccatgtgaaaaatcttgaatggctttat
ctttctaataacaaactagagtcgttgccagcagcccttttcaacttgcagaaactccgg
tacttagaactgagttacaactctattgctataattccagcagatatcgggactttccaa
catctgcagtactttgctattacaggaaataaagtggagactctaccaaaacaactattt
aaatgtactaagctgagaacattaaatctgggacaaaactgtattacctcgatccctgaa
agtattggtcagctatatcagctaatacagttagaactaaagggtaactgtttgtaccgt
cttccagcacagctaggccagtgtaagctacttaagaaaagtgggcttattgtggaggat
cacatctttgacacactgcctccagaagttaaagatgtgtttaatcaagatccaacttca
ggaacaacattcgccaatgggatttag
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