Latimeria chalumnae (coelacanth): 102346118 Help Entry 102346118         CDS       T02913                                  Symbol COL4A5 Name (RefSeq) collagen type IV alpha 5 chain   KO K06237   collagen type IV alpha Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm04382   Cornified envelope formation lcm04510   Focal adhesion lcm04512   ECM-receptor interaction lcm04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lcm00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102346118 (COL4A5)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102346118 (COL4A5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102346118 (COL4A5)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     102346118 (COL4A5)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lcm04147]     102346118 (COL4A5)    00536 Glycosaminoglycan binding proteins [BR:lcm00536]     102346118 (COL4A5) Exosome [BR:lcm04147]  Exosomal proteins   Exosomal proteins of other cancer cells    102346118 (COL4A5) Glycosaminoglycan binding proteins [BR:lcm00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102346118 (COL4A5) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  102346118 NCBI-ProteinID:  XP_014345252 Ensembl:  ENSLACG00000007854 LinkDB All DBs Position Un AA seq 1647 aa AA seqDB search MDRLGGPSAPFLVLIHVLLHHILTCVSAVLQACHGCSSGSKCDCSGVKGEKGERGFPGLE GQMGLPGFPGPEGPPGPRGPKGSDGFPGPVGPRGIRGPPGLPGFPGTPGLPGLPGQDGPP GPLGIPGCNGTKGEHGFPGSPGFPGLQGPPGPPGIPGLKGEPGDFTTSMLPGQKGDPGIP GRPGVPGPQGSDGSPGPLGPRGPPGRPGSPGSPGSPGPKGNMGLNFQGPKGEKGVPGLPG PPGPPGQIGEQKRPDDIEYLKGDKGDKGDFGKPGPRGSPGPPGLPDGGKGEKGEPGEAGK RGKPGKDGEPGRPGFDGLPGPPGNSGFPGQPGLKGDKGDFGRPGPPGPVIPIPGVGDIVG PKGNIGFPGAQGLKGERGPSGPSGFPGQPGAPGQPSTGTPGAPGFPGERGQKGDAGPPGF SLPGPPGLDGQPGLPGPPGPPGPSGPTDICQPGPPGLPGFQGERGFPGERGIKGGKGETC FNCIGDAIVGPLGPPGPPGSPGLAGSPGFPGAKGQPGFPGGTGPMGPPGSPGIPGLPGPQ GVKGDRGDAISLPGMKGDKGGPGFPGPPGLPGLDGSPGRDGRPGIPGPKGDPGGFAFKGE RGLPGDPGIPGAPGERGLVGPPGFGPQGPPGEKGIQGVSGRSGAPGSPGAKGEPGVTETQ PGLPGPPGAPGDPGSVGPPGDPGLPGQPGLPGLPGAKGDPGLPGIGLPGQPGQKGFIGVP GPPGPPGTPGRSGFDGLPGTPGLPGVKGDPGIGQPGPQGPPGPPGPKGIFGPKGDPGFPG NPGQPGRSGFDGTPGAKGDPGPVGPSGPQGTPGLPGIGGQGPPGPPGLPGPSGPPGFPGI AGEKGDPGSPGLDIPGPPGDRGNPGFPGSSGPRGPSGPPGAPGRDGAPGVPGFKGEMGVM GTPGPPGTPGAPGSNGYPGPKGDDGLPGQPGRPGSQGFKGDKGDRGVPGAPGSFSPPAGA KGQKGESGFPGLPGDPGPKGIQGVPGDLGIPGKDGLPGLPGQTGLKGEPGFPGQPGLIGN PGLKGSIGEMGLPGPPGGKGSPGGPGRPGQPGAPGGVGFKGVKGDPGLPGSGLPGFPGPK VCLHGTGLKLLQNSFSQIKTFDKRTRTPGIPGPKGIDGPPGSSGLPGPSGTPGQPGQPGG PGSSGEKGQPGRDGIPGPAGIKGDAGQPGIGRPGSPGLPGLPGPKGDAGFPGIPGAPGVP GLKGETGFPGMPGVQGPLGPPGQPGRPLEGPKGNPGPSGPPGRSGPPGPPGLPGPEGPRG PPGFGGLKGEKGNPGLPGQSGFPGLKGDPGTPGIPVSNGEHNENRAFLEMSTAGCGYLSS KVSCMKGTIGPPGRAGTPGDIGNQGPPGPPGSPAPAAQPIIVKGDPGFPGPRGPPGQRGL SGPPGLPGPPGPLGSPGDDGTDGPPGFNGPEGRKGDTGPSGQPGQRGFPGPPGPDGLQGP PGLPGSGSIAHGFLITRHSQTTEVPVCPFGTSRIYDGFSLLYVQGNERAHGQDLGTAGSC LRRFSTMPFMFCNINNVCNFASRNDYSYWLSTLQQMPMNMAPVNGESIKPFISRCTVCEA PAMVIAVHSQTIQVPLCPLGWDSLWIGYSFMMVRKLAENYSELRPNVVDLFISFVFLLLN RKPQSETLKAGELQMRVSRCQVCMKRT NT seq 4944 nt NT seq  +upstreamnt  +downstreamnt atggacaggcttggtgggcctagtgctcctttcctggtcctaatccatgttctcctacac cacattctaacttgtgtttccgctgttttgcaggcttgtcatggttgttcatcgggatca aaatgtgactgcagtggagtgaagggcgaaaagggcgagagggggtttcctggtttagaa ggacagatgggtttgcctggatttccaggaccagaggggccccctggacccagagggcca aagggtagcgatggatttccaggaccagttggaccgagaggaattcgggggcctcctggc ctgccaggtttcccaggaactccaggtcttcctggattaccaggacaagatggcccacca ggtcctctaggtatcccaggatgcaatgggacaaagggagaacatggcttcccaggcagc ccagggtttccgggtctgcaaggccctccaggaccccctggtatacctggtctgaaggga gaaccaggtgattttactacgtcgatgttgccaggacagaagggcgacccaggaattcca ggtcgtccaggagtgccaggccctcaaggaagtgacggttctcctggtccactaggacct cgtggtcctccaggtcggccgggttctcctggttcaccgggttctccagggccaaagggt aatatgggtttgaattttcaaggtccgaagggcgaaaagggtgttccaggtctgccggga cctccgggccccccaggacagatcggagagcagaaacggcccgatgacatagagtatctg aaaggagataagggtgacaaaggggactttggcaagcccggaccacgaggcagtccagga cctccaggtctcccagatggtggtaaaggggaaaagggcgaaccaggagaagcaggcaaa aggggtaagccaggcaaagatggggagcctggtaggccaggttttgatggtttgccggga cctcctgggaactcaggctttcctgggcagcccggactaaagggagataaaggtgatttt ggtcggcctggccccccaggacctgttattcccatccctggcgtgggtgatattgttgga ccaaaaggtaatattggcttcccaggtgcacaaggacttaaaggagagcgtggaccatca ggtccttcagggtttccgggacaaccaggcgccccaggtcagcctagcaccggaacccct ggtgctccagggtttccaggagaaagaggccaaaaaggcgatgctggtcctccgggattt tctttgccgggccctcctggactagatggacaacctggtctcccaggcccaccaggtccc ccaggacccagtggccctactgatatctgccaaccaggaccaccaggccttccaggattt cagggagagcgtggttttcccggggaacgaggaatcaaaggtggaaagggagaaacctgc tttaactgtataggtgatgctatcgttggtcccctgggtccaccgggacctccaggctct cctggtcttgcaggtagtcctggttttcctggagcaaaaggccaacctggattcccaggt gggactggacccatgggcccccccggcagcccagggatcccaggtcttccaggacctcag ggggtgaagggcgatagaggcgatgctatttcacttcctgggatgaaaggtgacaaaggt ggccccggtttcccaggacctccaggtttaccaggattggatggaagccccggacgggac ggaaggccaggcatccctggacctaaaggcgatcctggtggtttcgctttcaaaggagaa agaggccttccgggtgacccaggcatcccaggtgcccctggtgaaagaggcttggtaggc cctcctggttttggcccccaaggccctccaggggaaaaaggcattcaaggcgtatctgga cgttcaggcgcccctggttccccaggtgcgaaaggtgaacctggcgtaactgagacgcaa cccggtctccccggaccgccaggagccccaggggaccctgggagcgttggcccaccaggt gatcctggcttaccagggcagccaggtctgccaggccttcccggagctaaaggtgacccg ggcctaccgggtattggattacctggacaaccaggtcaaaaaggttttattggagttcct ggtcctccaggccccccaggaacgccaggaagatcgggttttgacgggttgccaggcacg cctgggttgccaggcgtaaagggagatcctggaatcggtcagcccgggccgcaaggtcca ccgggtcccccaggaccgaaaggcatctttgggcccaaaggtgatcccggtttcccaggg aacccaggccagccgggacgctcagggtttgatggaacacctggagcaaaaggtgaccca ggtccagttggtccgtcaggacctcaaggaacaccaggtcttccaggaattggtggtcaa gggcccccaggaccccccgggctaccgggaccttctggcccaccaggatttccgggaatt gctggtgagaaaggtgaccctggttctccaggcttggacattcctgggcccccaggtgat agaggcaatcctggtttccctggaagctcaggtccaaggggaccatcgggcccaccaggg gcaccaggccgtgatggagctccaggagtcccaggttttaagggagagatgggagtgatg ggaactccaggtcccccaggcacccccggagctccaggaagcaatggctatccaggccca aaaggtgatgatggtttaccaggccagccggggcggccagggtcccaaggcttcaaaggc gataaaggggatcgaggagtgccgggagcaccaggttctttctctccacctgcaggagct aaaggacaaaaaggggagtcaggatttccaggcctgcccggagatcctggcccgaaaggc atacagggtgtgccaggtgatctaggaattccaggaaaagatggcttaccgggactaccg ggacaaacaggactcaaaggagagccaggtttccccggccagccaggcctcataggtaac cctggattaaaaggaagcataggagagatgggcttaccaggtccgccaggcggcaaaggc tcaccaggtggcccaggtcgcccggggcaacctggggctcccggaggtgttggatttaaa ggtgtgaaaggtgacccaggacttccaggttcaggtctgccgggtttccctggacctaag gtatgtttgcacggcaccggtctcaaattgctccagaactctttctcgcaaataaaaaca tttgacaaaaggacccgtaccccgggtattccaggcccgaaaggtattgatggacctcca ggcagttctggtcttcctgggccatcaggcactccaggacagccagggcagccaggtggt ccgggatcttcaggtgagaagggacaaccaggccgtgatggcattccaggcccagctgga ataaagggcgatgcaggtcagccagggattggacgtccagggtcaccaggtcttccggga ttaccaggaccgaagggagatgcaggatttcctggtattccaggagcccctggtgttccg gggctgaaaggtgaaacgggcttcccaggtatgccaggggtgcagggcccgctgggtccc cctggccagccagggcggcccttggaaggacccaaaggaaatcctgggccgtcaggtcca ccaggacgatcaggccctccaggtcctccaggtctcccaggtcctgaggggccccgcggc cctcctggatttggagggctgaagggcgagaaaggaaaccctggcttgccgggacaatcg ggattccctggactgaaaggagacccaggaactccaggaatacccgtaagtaacggagaa cataatgagaacagagcctttttggaaatgagcactgctggttgcggctacctatcttcc aaggtatcatgtatgaaaggaaccattggtccaccaggtcgagctggaaccccaggagac attggaaatcagggcccaccaggtccaccgggctcgcctgctcccgcagctcaacccatc atcgtcaaaggagatccaggttttccaggaccccgtggaccaccgggacagagaggctta tctggaccacctggcttgcctggaccaccaggtccattgggctcccccggtgacgatggg acggatgggccacctggattcaacggcccggagggacgaaagggagacacgggtccatct ggtcaaccaggtcagagaggtttcccgggtccacctggtccggatggtttacagggccct cctggccttccaggaagtggatcgatagctcatggattcctgatcacacgccacagtcaa accacagaggtgccagtgtgtccatttggaactagcaggatctacgatggtttctctctg ctgtatgtacagggcaatgagagagcgcatggacaggacctgggcactgcgggtagctgc ctccggcggttcagcacgatgcccttcatgttctgcaacatcaacaacgtctgcaacttt gcctccagaaacgactactcctattggctctccactctacaacaaatgccgatgaacatg gcacccgtgaacggggagagcatcaagccgttcatcagtaggtgtacagtgtgtgaagct ccagccatggtgattgcagttcacagtcaaaccattcaggtcccactatgccctttggga tgggactcactctggatcggatactccttcatgatggtacggaaactggccgagaattac tctgaactaagaccaaacgtcgtcgatctttttatttcatttgtgtttttacttctgaac aggaaaccccagtcagagacgctaaaggctggagaactacagatgagagttagtcgctgt caagtttgcatgaagaggacgtaa

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