Latimeria chalumnae (coelacanth): 102346133
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Entry
102346133 CDS
T02913
Name
(RefSeq) nucleolar transcription factor 1-A-like
KO
K09273
upstream-binding transcription factor
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102346133
03021 Transcription machinery [BR:
lcm03021
]
102346133
Transcription factors [BR:
lcm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
102346133
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
102346133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
NOA36
Motif
Other DBs
NCBI-GeneID:
102346133
NCBI-ProteinID:
XP_014347912
LinkDB
All DBs
Position
Un
AA seq
833 aa
AA seq
DB search
MYFKLSDLEKSICKLFFKTQSQAVFYSALYFLLVSPGVPPPAALGGVSDRTRRSFCRIRF
VPTPRGLAGEICREKGKIYTDRPGFFFFFITKTQIAGVSPFEPVYRTKERDLDEALSTFA
MNGATNVSTSTQTVHIKADPEEWNKEDLLTLLDRIKGVLPEQDCMKYKTTESHFDWEKVR
FGLFTGDMCKQRWQKLSCEVRKFRTMTELIIDALELVKNPYKGKKLKTHPDFPKKPLTPY
FRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPEKKKLKYIQEFQQEKEEFEKAMTRF
RVMLFSRCRPIVVRSQVSSLCKALKLRLASQEVAGITNLLRCRLENGLKLLLFVLQVSPK
ELKEALRRQWSQLSDKKRLKWISKALELQKDYEASMRAYQEAHPESTLEETVKSVLTKAE
RQLKDKFDGRPTKPPPNGYSLYCAELMVNMKDVPSTERMVLCSKQWKIMSQKDKDSYQKR
CEQKKKQYETDLQRFLESLPDEERDRVLIEEKLGSSRMGPQGQTISPLRAKSPSSKKYKD
AEKATRAEQVQRMQNLVKDKRDSKRKVKLPETPKTAEEMWQQSIIGDYLAKYRNDRKKAQ
VAMEATWNAMEKKEKIPWIKKAAEDQKRYERELAEIRSPMAPLTQKKPKFDGEPKKPPMS
GYQMFSQELLTNGELNHFSLKERMVEIGKRWHKLSQSQKDKYKKMVEEQQIEYKAELEAW
IKSLSPHERAIYKEYSSVKRRNTTKSTTPAAKVRVPAKGKQESSDSEDDEEEKSDSSDSD
DEEEEDSSASSDSDEEEDEDDNEGEEENEEDDDDQSEASSSSSTGESSDSDSD
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtattttaaattaagtgatttagaaaagagcatctgtaaattattttttaaaactcaa
agccaagctgtgttttactccgcgctgtattttctcctggtttcccctggagttcctccc
cctgcggcgctgggcggagtttctgaccggaccagacgctccttttgtcggatccgtttc
gttccgactccccggggtttagctggggaaatctgcagagaaaaagggaaaatttacacc
gatcgtccaggatttttttttttttttataacaaaaacacaaatcgccggcgtttccccc
tttgagccagtatatagaacaaaggagagagacttagacgaagccttatccactttcgcc
atgaatggagctacgaatgtctccacttccacacagaccgtgcacatcaaagcagatcca
gaagaatggaacaaggaggacctgctgacattgttggatcggataaaaggtgtcctcccg
gagcaggactgcatgaagtacaaaaccaccgagtcacactttgactgggagaaggttcgc
tttggactcttcaccggggacatgtgcaagcagagatggcaaaagctatcttgtgaggtt
agaaaatttcgcaccatgacagagctgatcattgatgcactcgagcttgtgaagaaccct
tacaaaggcaagaagctcaagacccacccggactttcccaagaagcccctgactccctat
ttccggttcttcatggagaagagagccaaatatgccaagatccacccagagatgagcaac
ctggatctgaccaagatcctgtccaagaagtacaaggagcttccagagaagaaaaagctg
aagtacatccaggagtttcagcaggaaaaggaagaatttgaaaaggccatgacgagattc
agagtgatgctgtttagtcgctgtcgacccatagttgtacggagccaggtttccagcctg
tgtaaggcactgaaacttcgtttggcttcgcaggaagtagccggcatcaccaacctgctg
cgttgtcgcctggagaatggtctcaagctcctgctgtttgtcctccaggtgagtccaaag
gagttgaaggaggctttgcgccggcagtggtctcagctctcggacaagaagcgtctcaag
tggatcagcaaagccttggagctccaaaaggactacgaggcgagtatgagagcataccag
gaggctcaccccgagtccaccctcgaagagacagtcaagtccgtcctgacgaaagcagag
cgacagctgaaggacaagtttgacgggcggccgactaagccaccgccgaacggctattct
ctgtactgcgccgagctgatggttaacatgaaagatgtgccaagcactgaaaggatggtc
ctctgcagcaaacagtggaagatcatgtcccagaaagacaaggacagttaccagaagcgc
tgtgagcagaaaaagaaacagtatgaaaccgacctacagaggttcttagagagccttcct
gacgaggagagggacagagttttaatagaggaaaaacttgggagctcgaggatggggccg
cagggacagaccatcagtcctctacgggcaaaatcaccctcctcaaagaagtacaaagat
gcggagaaggccacacgagcagagcaggtccaaaggatgcagaatctcgtgaaggacaag
agagacagcaagaggaaggtcaaactgcccgaaacgcccaaaacagcagaagagatgtgg
cagcaaagcatcatcggagactacctggcaaaatacaggaatgaccgcaagaaggcccaa
gttgccatggaagccacctggaatgccatggaaaagaaggaaaagatcccctggatcaag
aaagcagctgaggatcagaagcgatacgagagagagctggcagaaatcaggtctcccatg
gcaccactgactcagaagaaaccaaagtttgatggagaacctaagaagcctccaatgagt
ggctatcagatgttctcccaggagctgctgacgaacggggagctcaatcacttcagcctg
aaggagcggatggtggagatcggcaagcgctggcacaagctcagccagtcacaaaaagac
aagtacaagaagatggtggaggagcagcagatcgagtacaaggcagagctggaggcctgg
atcaagtccctctcgcctcatgaaagagctatttacaaggagtattcttctgtgaaacgc
agaaatacaaccaagtccacaaccccagcagccaaagtcagagtgccagcaaaaggcaaa
caggaatcttcagactcagaagacgacgaagaagagaagtcggattcctctgattcagat
gacgaagaggaggaggattcatcggcttcctcagacagcgatgaagaggaagatgaggat
gataacgaaggggaggaggagaatgaagaagacgatgatgaccaatcagaagccagcagc
agctcctcaacaggagagtcctcggactcagactcagattag
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