Latimeria chalumnae (coelacanth): 102346239
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Entry
102346239 CDS
T02913
Symbol
ABCB10
Name
(RefSeq) ATP binding cassette subfamily B member 10
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102346239 (ABCB10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcm02000
]
102346239 (ABCB10)
Transporters [BR:
lcm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
102346239 (ABCB10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_16
AAA_29
Zeta_toxin
AAA_25
DUF87
RsgA_GTPase
AAA_30
AAA
AAA_33
nSTAND1
AAA_5
cobW
NACHT
NB-ARC
Motif
Other DBs
NCBI-GeneID:
102346239
NCBI-ProteinID:
XP_006008385
Ensembl:
ENSLACG00000004295
LinkDB
All DBs
Position
Un
AA seq
733 aa
AA seq
DB search
MSCRVFSVRGMRRCLGKVPLGTTWKGAACVPRNKSTAIVCGLSRYKLLGPLNRQSCALRN
YRKQRENHLFPCSISVRPGISHFPVVNCTLNWVGRAGLTVRGYSTSSSSKNHEGDLKDVI
AGTERNQLKEQKSGKKTTVSAEDSRRLLALAYPERWRLAAAVGFLGISSVVTMSAPYFLG
RVIDVVYNNPTTDITSSLTSLCTALTGVFLCGAAANAARVYLMQISGQRVVKHMRESLFA
SVLRQEVGFFDKTRTGELINRLSSDTVLLGRSVTENISDGLRAVVQAMAGVGMMFYVSPK
LAAFVLGIVPPLAVLAVVYGRYLRRLTRVTQDTLAQATQLAEERIGSIRTVRAFGKEMFE
VEKYGKKMDYVLQLGKKEAMARAGFFGITGLSGNLIVLSVLYKGGLLMGNAYMTVGELSS
FLMYAFWVGISIGGLSSFYSELMKGIGAGGRLWELLDRKPAFPLNEGIVLSRETFKGALE
FRDLHFAYPTRTEAPVFQRLNLYIPAGSVMAVVGPSGSGKSTLVSLLLRLYDPTSGAIII
DGYDLRHLNPQWLRTNIGTVSQEPILFSCSIAENIAYGVKDPSQVTAEEIYKAAEIANAN
TFISNFPHGFDTVVGEKGILLSGGQKQRIAIARALLKDPRILLLDEATSALDAENEYLVQ
EALDRLMEGRTVLIIAHRLSTIQNANAVAVLDQGRIIECGKHEELLAIPNGVFRKLMEKQ
AFLQNNQKFVLNA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtcgcgtttttagcgtgaggggcatgagaaggtgcctggggaaggtgccgctg
ggcacgacgtggaagggggctgcttgtgttcccagaaacaaatcgacagctatagtatgt
ggactaagtcgctataaactgctcggacctttaaacaggcagtcgtgtgcactgaggaac
tataggaagcagagagaaaatcatttgtttccttgttcgatttctgtcagaccgggaatt
tctcattttccagttgtcaattgcactttaaattgggttggtagagcaggtttgacggtg
cgtggatacagcacgtcctcctcttccaagaaccatgagggggatttaaaggacgtgatc
gccgggacagagagaaaccaactgaaagaacagaagagcggaaagaaaacgactgtttct
gcagaagacagcagaaggcttctggctttagcatatccagaaagatggcgattggcagct
gcagttggatttcttggaatttccagtgttgtgaccatgtcagcgccctattttcttggc
agagttattgatgttgtttacaataacccaaccacagacataaccagcagtctgacctcc
ctgtgcactgcgctaactggagtcttcttgtgtggagctgctgctaatgctgctcgtgtc
tacctcatgcagatatcgggccaaagggttgtgaagcatatgcgagagtctttatttgca
tcagttctaaggcaagaagttggattttttgacaagacacgcacaggggagctaattaac
cgcttgtcctcagacactgttttgctaggacgatcagtgactgaaaatatctcagatgga
ctaagagctgttgtccaagcaatggctggcgttggcatgatgttttatgtgtctccaaaa
ctcgctgcttttgttctcggcatcgtacctcctctggcagttttagctgtggtatatgga
agatatctgcgcaggcttaccagagttacccaggacactcttgcacaagcaacacagctg
gcagaggaacgtattgggagcataagaacagtccgagcatttggaaaagaaatgtttgaa
gtggagaaatatggaaaaaagatggactatgttctgcagctaggaaaaaaagaagcaatg
gctcgggcaggcttttttggaattacgggactttctgggaacctgattgtactctcagta
ttgtacaaaggaggattactgatgggcaatgcttacatgacagttggtgaactctcctcc
ttcctaatgtatgccttctgggtgggcataagcattggaggtttgagctccttttattca
gagttaatgaagggcattggtgcaggaggacgtttgtgggagcttctggacagaaagcca
gcgtttccactcaatgagggtatagttttgtcaagggaaacatttaagggggctcttgaa
ttcagagatctccattttgcatatccaactcgcacagaggccccagttttccaaagactt
aacctgtacattccagctggttctgttatggcagtggttggacccagtggctcaggcaaa
tcaactctagtatcactgttgttaagattatatgatcccacatctggtgccattatcatt
gatggctatgatctgcgtcacctgaatccacaatggttgcgcaccaacattggaacagtg
agccaggaaccaattctgttttcttgctcaattgctgaaaacattgcctatggagtaaag
gatccttcccaggtcactgctgaagaaatctacaaagctgctgaaatagctaatgccaat
acttttatcagcaacttcccccatggatttgatactgtagttggggaaaaaggaattctg
ctttcaggtggtcagaaacaacggatagcaattgctcgagctctactcaaggatcctcga
attcttttgctggatgaagctacaagtgctttggatgcagaaaatgaataccttgtacag
gaggccttggatcgattgatggaagggagaacagtactcattattgctcatcgtctttct
accattcagaatgctaatgctgtcgctgtcttggaccaaggcaggataattgaatgtgga
aaacatgaagaacttcttgcaatccctaacggtgtttttagaaaactcatggaaaagcaa
gcatttctacaaaacaaccaaaaatttgtacttaatgcttaa
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