Latimeria chalumnae (coelacanth): 102346466
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Entry
102346466 CDS
T02913
Symbol
GEN1
Name
(RefSeq) GEN1, Holliday junction 5' flap endonuclease
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102346466 (GEN1)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102346466 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
DUF496
Motif
Other DBs
NCBI-GeneID:
102346466
NCBI-ProteinID:
XP_005997584
Ensembl:
ENSLACG00000014653
LinkDB
All DBs
Position
Un
AA seq
989 aa
AA seq
DB search
MGVNELWQILEPVREHVHLRSLSGKILAVDLSLWVCEAQAVKGMMGTVAKPHLRNLFFRV
STLTLMGVKLIFVLEGDAPKVKADTMHKRTKMRYEFSRKMGGATLRTGRSYFNYFLKECC
EMLECLGIPWVQAAGEAEAMCAYLNANGYADGCITNDGDVFLYGAQTVYKNFTMNTKDPH
VDCYKMSAVKAKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLEILKGQSLLHRF
NKWKEQFQDSMASDVPIKKRAHCAVCQHPGSSKEHERTGCKLCGSERFCEPHHYDYSCPC
DWHQSEQERQANSVENNVKKKAKLCKGFPFNEVISEFLVTKDEPIKTIMWKRPSLLSAEN
FALNKMEWPKHYTCEKLLTLLTYFDMKERRSGRSSPNQLQPIRILKTRIRNGIPCFEIEW
QKPEHYISADGQPEDSRNSVITIEEESLIQAAYPDLVVLFHKEKAEAQEKKLKDKKPKIK
KDHNVDDVEVLLSQMSLQTTSKICKEAPGNHCDSTRVQENIFKSATVSSSKNECLSKLAT
WDPVEIASKHSSEPETTVEWASPPLSSRQVLSASSPNVSAVIAEMHLSDIDWEGTSFSTP
PSKHTVEELSSTLRREEPEHSLQSILQNCCVASLVTGETSKNKVGAAVNVPSAQDTVPVD
MRGESSKTDLLVSDPQNLCLRDRILLKNFSKSDLSDQSGIIHLRSLLPEELRKTDLNTEG
ENDISKTHKDTSDLLISNIVHCQAKEMSISKSFKRSTPQSYLGQKASHILTKGTVEKVPS
GEKNVKSNMLQNKATVIAAAESSIVSGDLRPHCQPANTKISDCKGEKVGNKTTATIQKSV
IKRSVCLAACSSSEDSDSENFKSCKQKPQNKHKVVLSSGGKCFSSQYKPCTKEAVVSGTS
QRPAKQLEFIVKEDARAAATSSSMTLESASAVTINEKQNCFRNLPQRSESFQSYPNDASP
QQSDGEDSVILLDSPLPLSERLKLRLQSC
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgagttgtggcagattctggagcctgtccgagagcatgtccatctccga
agtctgagtgggaaaatcctggctgtagatttgagcctttgggtctgtgaggcacaagcg
gtaaaagggatgatgggaacagttgccaagccacatctcaggaacttgtttttccgagtc
tcgactctaactttaatgggagtgaagctgatctttgtgctggaaggtgatgcaccaaaa
gtaaaagcagatacaatgcataagaggactaaaatgaggtatgagttctccagaaaaatg
ggaggtgcaaccctgagaacaggacgatcctatttcaattattttctaaaagagtgctgt
gaaatgctggaatgtttgggaatcccatgggtccaagcagctggtgaagcagaggcaatg
tgtgcttatttaaatgctaatggttatgcagatggatgcatcactaatgatggagatgtt
ttcttgtacggagctcaaactgtttataaaaactttaccatgaacacaaaggatccccat
gtagattgctataaaatgtcagcagtaaaggcaaaactaggacttgacagagatgcttta
gtggggttagcagtactgcttggctgtgattatcttccaaagggcgttccaggggttgga
aaagaacaagctttgaaacttttagaaattctaaaggggcagagtttactacacaggttt
aacaagtggaaagagcaatttcaggactccatggcttcagatgtgccaattaaaaagaga
gctcactgtgcagtatgtcaacatccaggttccagtaaagagcatgaacgcactggctgt
aaactgtgtggaagtgagagattctgtgagccgcaccactatgattacagctgcccctgt
gactggcaccaatctgaacaagaaagacaagctaattctgtggagaacaatgtcaaaaag
aaagcgaagctatgcaaggggtttccgtttaatgaggttatcagcgagtttcttgtcaca
aaggatgaacctattaagaccataatgtggaaaagaccaagtttattgtctgctgagaat
tttgcattgaacaagatggagtggcctaaacattatacctgtgagaaacttttgacatta
ttgacctattttgacatgaaggaaagaagatctggtagaagcagtcccaaccaactacag
ccaataagaatactcaagacaagaattcgaaatggaatcccctgctttgaaattgaatgg
caaaaaccagagcactacatttctgcagatggacaacctgaggattctcgaaattctgta
ataaccatagaggaagaatctctcattcaggctgcttatcctgatttggttgtcctattt
cataaggagaaggctgaagcccaagaaaagaaactgaaagataagaaaccaaagataaag
aaagatcacaatgtggatgatgtagaagtactattgtctcaaatgagcttgcaaactaca
tctaaaatctgcaaagaagcaccaggaaaccactgtgattctacaagggtacaagaaaac
attttcaagtcagctacagtgtcttccagcaaaaatgagtgcttgtcaaaattggccaca
tgggatccagtggaaattgcatcaaagcacagttcagaacctgagacaacagttgagtgg
gcatcacctccactgtcaagtagacaggttctcagtgcatcatcacctaatgtttctgca
gtgattgcggagatgcatttgagtgacatagactgggagggaacttcttttagcactccc
ccatctaaacacacagtggaagagctttccagtactttaagaagagaggaaccagaacac
tctcttcaaagtattcttcagaactgttgtgtagcttctttggtcaccggtgaaacatcc
aaaaacaaggtaggagcagcagtcaacgtaccttctgcacaggatacagttcctgtcgac
atgagaggtgagtcatcaaagacagatctgttggtttcagatcctcaaaacctgtgcttg
agagaccgaattctcttgaagaactttagtaagtcagatctttcagatcagtctgggata
attcatctaagatctttgttgccagaggaattgagaaaaactgatttaaacacagaaggt
gaaaacgatatttcaaaaactcataaagacactagtgatttactcatatctaacattgtc
cattgccaagcaaaagagatgagcataagtaaaagctttaaaagaagcactccacaatct
tacctgggacaaaaggcaagccatatactgacaaagggtacagtagaaaaggtgccctca
ggagaaaagaatgtcaaatcaaacatgttacaaaacaaagccactgtaatagcagcagca
gaatcttccatagtgtcaggtgacttaagaccgcattgtcaaccagcaaatactaagatc
tctgattgcaaaggtgagaaagtgggtaataaaacaaccgctactattcagaaaagtgta
attaaaagaagtgtttgcctcgcagcgtgctcctccagtgaagacagcgactctgaaaat
ttcaagagttgcaagcaaaaaccccaaaataaacacaaggttgttttgtcttctggtggg
aaatgtttctcttcccagtataaaccgtgtacaaaggaggcagtagtaagtggcaccagt
cagcgaccagctaagcagctggaattcattgttaaggaggatgccagagctgcagcaaca
agtagctctatgactctagaaagtgcctctgcagtcacaattaatgagaagcagaattgt
ttccgcaatcttccacaaagaagtgaaagcttccagtcctatccgaatgatgcaagtccg
cagcaaagtgatggagaggattctgtcattttattagacagtccattgccactatcagag
aggttaaagctcaggcttcaaagctgttaa
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