Latimeria chalumnae (coelacanth): 102346578
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Entry
102346578 CDS
T02913
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00600
Sphingolipid metabolism
lcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
102346578 (SMPD4)
Enzymes [BR:
lcm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
102346578 (SMPD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
102346578
NCBI-ProteinID:
XP_014344765
Ensembl:
ENSLACG00000013989
LinkDB
All DBs
Position
Un
AA seq
853 aa
AA seq
DB search
MAGPPIQQQANFLLASLKADFENKSLSQRCHDLAKVIEDYPVKELSSIFPWLIESAFGSL
DGSIIGWNLRGLQSRMNPIEYSTVVEFLDPSGPMMKLVYKLQAEEYKYEFPVSFLPDPVR
ASILEGVLPDCPLYHSKIQIPSLGGLSLSISLNPFECFLFYFAANLLTQRARTFLSERQH
PKSYLVGQPVSTSDSAYFVLVDRYLKYFLPTEGNLPPPPMSLNPGGTVSPPVPRSPAIQF
ASYGIHHSSLLKRHISHQPSVNADPAAQEIWRSETVLQVFVEMWLHHYSLDLYQKLQSPH
MKAVCDHKGSIKLEILQYRLGVSNVHYGTSLQPGYGTLRAYQEPFNPSEEHVLVVRLLIK
HLHAFSNSLRPEQISPLAHSHTASPLEEFKRVVIPRFVQQKLYVFLQHCFGHWPLDASFR
VVLETWLSYLQPWRYPPEKWLHAFQENQERSVPDKWAAFVQENLLLYTKLFQGFLNRALR
TDLVSPKNALMVFRVAKVFTQPNLAEMIQKGEQLFLEPEHVLHHRQQRIFMTPSLGGSFL
SLRQPAITDASFKVKNHVYSLEGQECQYRPMFGTEVRNMVLKLAQQIAQAKQTAKSISDH
SVEAASSRSFLSWFKFDSPDFSSSYMGNDLDELGPSNIKKTDEYLDKALENLCHVFRLNA
LQLSQMAANFTTAQNDGGKKQLPDCIEGETGLILTPLGRYQIINGLRRFDIVYQGDPELQ
PIRSYESAVLVRLLFRLSSAVNERFAGDMEALCARDNFLGRLSCYYLMPPPPLVERFRHS
PVTRRDLAPMQHPRVSLRFLASYRTLLSVLLLFFLASLFSIGPLACAFLILVVVALHGIV
MTFFANRRHPHQH
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggctggtccacctattcagcagcaggccaacttcttattggccagtcttaaagcagac
tttgaaaacaaatcgctgagtcaacgatgccatgacctggcaaaagtgatcgaggactat
cctgttaaggagttgagctccatattcccgtggctgatcgagagcgccttcggcagtctg
gacggcagtattataggatggaacctgcgtggtttgcagagccgaatgaaccccatcgag
tacagcaccgtggttgagttcctggaccccagcggcccaatgatgaagctggtttacaag
ctgcaggctgaggaatacaaatatgaatttccagtttccttccttccagatcctgtgagg
gcctcaatcctggagggcgtcctgccagattgtcctctgtaccacagcaagatccagatt
ccctccttgggcggactgagcctcagcatttcactcaatccttttgagtgcttcctgttt
tattttgctgcaaacctcctcacgcagagggcgagaacattcctgtcggagagacagcat
ccaaaaagttacttggtcggtcagcccgtctccacctcggatagcgcctactttgttctg
gtggaccgatacctgaagtacttcctccccaccgaagggaacctcccaccacctcccatg
tccttgaaccccggaggaactgtttcccctccagtgccaagatctccagcgatccagttt
gcctcttatggtattcatcacagcagcctcctgaaacgtcacatttcccatcagccctcc
gtaaacgcagacccggctgcccaggagatctggagatctgaaactgttctccaggtcttt
gtggaaatgtggcttcatcattactctctggacttgtaccagaaactacagtctccccat
atgaaggctgtttgcgatcataaagggagcatcaagctggagatccttcagtacagactt
ggtgtctccaatgttcactacgggacttctctccagcctggctacggtaccctccgtgca
tatcaagagccctttaacccctcagaggaacacgtgctggtggtgaggctgcttataaaa
catctccacgcgttttccaacagcttgaggcccgagcagatctctcccttggctcactcc
cacaccgccagcccgctagaggaattcaaacgagttgtgattcctcgattcgtccagcag
aagctctacgtctttctgcagcattgcttcggacattggcctctggatgcctccttcaga
gtggttctggagacgtggttgagctatctgcagccatggagatatccccccgagaaatgg
ctccacgccttccaggaaaaccaggagcgcagcgtccctgacaaatgggccgcctttgtg
caggagaacctgctgctgtatacaaagctgttccaggggttcctgaaccgagcactgcgc
accgacctggtgagccccaaaaatgccctgatggtgttccgagtggcgaaggtcttcacg
cagcccaaccttgcggaaatgatccagaaaggagagcagttgttcctggagccggaacac
gtcctccatcaccggcagcagcgaatcttcatgacgccgagcctcggcgggagcttcctg
tcgttacggcagccagccatcaccgacgcctccttcaaagtaaaaaaccacgtctacagc
ctggaggggcaggagtgccagtataggccgatgtttggcaccgaagtccgaaatatggtg
ttaaagctggcacagcagatagcccaagcaaagcagaccgcaaagtcgatatcggatcac
tcagtggaggctgcctctagccgctccttcctgtcctggttcaagttcgactcgccagac
ttcagctcctcctacatggggaacgacttggacgagctggggcccagcaacatcaagaaa
actgacgaatatctggacaaagccctggagaacctctgtcacgttttcaggttaaacgca
cttcagttgtctcagatggcggcgaatttcacgacggctcagaatgacggtggcaagaag
cagcttcccgattgcatcgagggggagaccgggttaatcctcaccccgctcggcaggtac
cagatcatcaatggactgcgcaggtttgatatcgtgtaccagggcgaccctgagctccag
ccaatcagaagctacgaaagtgctgtgttggtgcggcttctgttcaggctgtcctcggct
gttaacgaaaggtttgcaggtgatatggaggccctttgcgccagggacaattttctggga
aggctatcgtgctattacctgatgccccccccacccctggtggagaggtttcggcacagc
cccgtgacgcgacgggatctggccccgatgcagcacccgcgggtcagcctccgattcctg
gccagctatcggactctgctctccgtgctcctcctcttcttcctagcgtccctcttctcc
atcgggccgctggcctgcgcctttttgatcctggtagtggtggctctccacggaatcgta
atgactttctttgccaacagaaggcacccccatcagcattga
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