Latimeria chalumnae (coelacanth): 102346603
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Entry
102346603 CDS
T02913
Symbol
CALCOCO2
Name
(RefSeq) calcium binding and coiled-coil domain 2
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04137
Mitophagy - animal
lcm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102346603 (CALCOCO2)
04137 Mitophagy - animal
102346603 (CALCOCO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102346603 (CALCOCO2)
03029 Mitochondrial biogenesis [BR:
lcm03029
]
102346603 (CALCOCO2)
Membrane trafficking [BR:
lcm04131
]
Autophagy
Xenophagy
Cargo receptors
102346603 (CALCOCO2)
Mitochondrial biogenesis [BR:
lcm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
102346603 (CALCOCO2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
CCDC39
ATG16
bZIP_1
Par-4_C
KIF21A_2nd
Fungal_TACC
CEP135_TSGA10_CC
DivIC
CCDC18_1st
DUF7501
Zn_ribbon_LysW
FKBP15
ERM_helical
Rod_CreS
CEP89
Motif
Other DBs
NCBI-GeneID:
102346603
NCBI-ProteinID:
XP_005990117
LinkDB
All DBs
Position
Un
AA seq
611 aa
AA seq
DB search
MSEREDEPPTSNIMGSANFSAVVFQEVQQSYVPGSPVICNYLLTQDIQPHSRDWIGIFKV
GWIGTRDYYTFVWAPIPNVTVGALPSEQKVIFEAYYLPREDGEFYQFCYVDHKGVVRGAS
TPFRFQSVVENYILEADDDILIVTVQEKVEENEKVRRELEKENAELKEAAENSTREMETL
RQFQEKAEKSEQVRQELEKENAKLQEAAESHVQELETLQGRLLKSQEDQQQLERKVGELE
RSKEAGEKQLEQLEKELGPCQEERSRVQEENQVLTQTVKSLKEQNEKLTGKVKQLKGEYE
TVWQESNSRKMEVNRLEEKNKKLMRENEQLEAKLKTVMDRIDALQFDVENYKKESEKLSS
QLEVWKQKAENTTESQQVETFRQQLAAAATNRKELAQRLKDMEVQLKEFKKQEIQSAQQL
KAERTSRVETEEKLRKVQEEKEHWRARFDKVDLQHQKCEIMITDLTKDLQDKDSLSQLYQ
MEKEDLQQQNKLLQNQVTELQETCSRIPPQPRPSGLQHQPAAATPVFSQAPGSVPVLRFQ
NPYVTDSVTETGDSLFAAQRCPVCDEELLLSEDGFEQHVQSHLRECHVCGRSLSVYSEQE
FDDHMYCHSIE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagagagaggatgaaccacccaccagtaacatcatgggctcggcaaatttttcc
gctgtggtcttccaggaggtacagcagtcgtatgttccaggaagcccggtaatatgtaac
tacctgctgacccaggacatccagccccacagccgggactggatcggcatatttaaggtt
ggttggatcggcactcgggactattacaccttcgtgtgggctcccattcccaatgtgacc
gtgggcgctttgccaagcgagcagaaggtcatttttgaagcgtactacctgccgagggaa
gatggggagttttaccagttctgttatgtagatcacaagggggtagtacgaggggccagt
accccgtttcgattccagtccgttgtggaaaattacatcttggaagcggatgatgatatc
ctgatagtaacagtacaggagaaagtggaagaaaatgagaaagtgcggagggagctagag
aaggagaatgccgagctgaaggaggctgcggagaacagcactagggagatggagaccctc
cgtcaattccaggagaaagcagagaaaagcgagcaggtgaggcaggagctggagaaggag
aatgccaagctgcaggaggctgcggagagccacgtccaggagctggagacactccagggg
agactcctaaaatcccaggaggaccagcagcagttggagaggaaagtcggagagctggag
aggagcaaagaggcaggagagaaacaactggaacagctggagaaggagctgggtccgtgt
caagaggagagaagccgagtgcaggaggagaaccaggtcctgacacagactgtgaagtct
ctgaaggagcagaatgagaagctgacagggaaggtgaaacagctgaagggtgaatatgag
actgtctggcaggagagtaacagcaggaagatggaagttaacaggctggaagagaagaac
aagaagctgatgagagagaacgagcagctagaagctaagctaaagacggtgatggatcgt
atcgatgcgctccagtttgatgtggagaattacaagaaggagagcgagaagctgagctcc
cagctggaagtctggaaacagaaggcggagaacaccactgaatcccagcaggtcgaaacg
ttccggcagcagctggctgctgctgccaccaatcggaaggaacttgcccagcgtctgaag
gacatggaggtccagctgaaagagttcaagaagcaggagatccagagtgctcagcagctg
aaagctgaaaggacctcacgagtagagacggaggagaaactgcggaaggtgcaggaggag
aaggaacactggagggctcgttttgataaagtggacttgcagcaccagaagtgtgagatt
atgatcacagatctgacaaaggatttgcaggacaaggattcgctctctcagctgtaccag
atggaaaaggaagacctgcaacagcagaataagctgctgcagaaccaggtgacagagctg
caggagacttgttcccggattcccccccagcctcgtccctcagggctgcagcaccagcca
gctgctgctactccagttttctcacaggcccctggaagtgttcctgtccttcgcttccaa
aacccgtatgttacggactctgttacagagactggcgacagtttgttcgctgcgcagcgc
tgtcccgtctgtgatgaggagctgctgctgagcgaggacggtttcgagcagcacgtgcag
agccacttgcgtgagtgccacgtctgtgggcggagcttgtcagtctacagcgagcaggag
tttgacgatcacatgtactgtcacagcattgagtga
DBGET
integrated database retrieval system
