Latimeria chalumnae (coelacanth): 102346875
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Entry
102346875 CDS
T02913
Symbol
BRAT1
Name
(RefSeq) BRCA1 associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcm03400
]
102346875 (BRAT1)
DNA repair and recombination proteins [BR:
lcm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102346875 (BRAT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_EZ
HEAT_2
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
102346875
NCBI-ProteinID:
XP_005990913
Ensembl:
ENSLACG00000009890
UniProt:
H3ANM1
LinkDB
All DBs
Position
Un
AA seq
842 aa
AA seq
DB search
MDNECTDLLPAVCAVLADPRQAISDDTCLEKLLDWFKAVIKREPGSSMLQGNPMLANLLI
DVARLKDPNPSILSFILRLTGLFAASEKGFCYLQEQEILCSLFGKEGVLGSGSWEDAIVR
CGWVQGIHTMLQHQEGLTFIEKSGGLETILDLQRDSSLFVASAASQLLAHILSFSFLNSA
GDSEECVPQLPDVTSRQPPSIPNFSWPVAAQKLIGHVENSLRLADACDVQRSLRLLIAVF
KTSQPVVMANLWLKISGPIEGRLRKDLSNQEQLLVEMILILLRQPVLHHPTYKLWDFVSL
ALRFLGPTHALALALGIVRSEGCPESLRTEALSALLFSMEYVLRSAGQQTPHSGLLDQNI
WEPSAIQSIFSRKSACVNFLSQSQSHVKDLLDMPSLSVPLPYSAMLRSVITVLQFCIGTT
FLATPSGISLSKNLIGCARVQRSAVDCLGSLSKWAVGSEHLDTVFDILLTYLKSQDTDSV
VFKKTLQTSLQWVLHLSSDPKSSVNCPQTCKFLKDDLFPVLEKRLLDVHWEVQDSVLEFI
TNITLAFKERKVFQEILTTSSIPSLLVNLLSDPESYVRASAITALGQTAYITNNSEISLH
MENGTFAKENIVVHLLEILSQDSEGFPRRAAVKVFTDWLAHSNLLCLEDLEESAASALEL
GCQDLDWEVKLYSLELAEVFLGQILPAPIPPTSYSSAEVSQAQPVAITLTEPLSKLCRLK
MCDFLFRALSDCDRPVAQKACSILAFLRGVVLGGEGISAEPVNCKPSDSKQTGVNLNDSR
DFSDINLQDPTQVLALLRVLDVESLHQNLDQCSDHLEKSPRSLLQDILASAENTGENGMD
CH
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgagtgcacagacttactgcccgctgtctgtgcggttctagctgatcccaga
caggccatttctgatgacacatgtttggagaaattgctggattggtttaaagccgttatt
aaaagagagcccggtagctccatgctgcaaggaaacccaatgcttgctaacttgcttatc
gacgtggcaagactgaaggaccctaatcccagcatcctctctttcatcctgcggctgact
ggactgtttgctgcctctgaaaagggcttctgttaccttcaggaacaggagatcttatgc
agcctgtttgggaaggagggagtccttggctctggctcatgggaagatgccattgtgcgc
tgtggctgggttcaggggatacacaccatgttgcaacaccaggaagggctgacattcata
gagaagagtggaggtcttgagacaatcctggatttacaaagagactcaagtttatttgta
gcttctgctgccagtcagctattggcacacattttatccttttctttcctgaattctgcg
ggtgactcagaggaatgtgttccccagctgcctgatgtgacaagccgccaacctcccagc
attcccaattttagttggccggttgctgcccagaaacttattggacatgttgaaaattcc
ttgagactggctgatgcttgtgatgtccagaggtcactgaggctactgattgctgttttt
aaaaccagccagccggtcgtaatggcaaacttgtggcttaaaatatctggaccaattgaa
ggccgcctgagaaaggacctcagcaaccaagaacagctgttggtggaaatgattctcatc
ctgttaaggcaacccgtgctacaccaccccacttataagttgtgggattttgtgagtctt
gctctacggtttctgggcccgacacatgcattggcgctggcccttgggattgtaagatca
gaaggctgccctgaatcattgagaacagaagccctcagtgctctacttttttcgatggag
tatgttctcagatctgctgggcagcagactccacactcaggtctgctggatcagaacatt
tgggaaccatctgccatccagagcatcttctctagaaaatcagcctgtgtaaattttctt
agtcagtcgcaatcacatgtgaaggatctcttagacatgccttctctctctgtcccattg
ccctacagtgccatgcttaggtctgttatcacagtgctacagttctgcattggtacaact
ttcctagccactccatcaggtatcagtctaagcaaaaacctgattggctgtgccagagtt
cagaggtcagcagtggattgtcttggtagtctttcaaagtgggcagtgggcagtgagcac
ctggacactgtgttcgacatccttctcacctacctcaagagtcaagacactgattctgtg
gtttttaaaaagactctgcagaccagcctccagtgggttctccatctttccagcgacccc
aagtccagtgtgaactgtcctcagacttgcaaattccttaaggacgaccttttccctgtg
ctggagaaacgtctgcttgatgttcactgggaagtgcaagactccgtccttgaatttatc
accaacatcactctcgcctttaaagagaggaaagtattccaggagatccttaccacctcc
agcattcccagtttgcttgtgaacctgctttcagacccagagagttatgtccgagccagc
gccattacagccctggggcagaccgcttacatcacaaataattctgaaatttccctgcac
atggagaatgggacttttgcaaaggaaaatattgtcgtccatttactagaaatcctgtca
caagactctgaaggcttccccagaagagcagcagtcaaggtatttactgattggttggca
cacagcaacttgctgtgcttagaagacctggaagaatcagccgccagtgccttggagttg
ggttgtcaagatttagattgggaggtcaagctttacagtttggaactggctgaagtcttt
cttggccaaattctccctgcaccgatcccacctacatcatactcctccgctgaggtttcc
caggcacagcctgtagctatcactcttacagaaccactgagcaagctttgcaggctgaaa
atgtgtgactttttgttcagagctctgtctgactgtgatagaccagtggcacagaaagct
tgcagcatcttagcgttcttgagaggggtggttcttgggggggaggggatctctgctgaa
ccagtgaattgtaaaccgagtgacagcaaacagactggagtgaacctcaatgacagcaga
gacttctctgacattaacttgcaggatccaacccaagtgttggcactgttgagggtattg
gatgtggaaagtcttcatcagaatttggaccaatgcagcgatcacctagagaaaagccct
aggtctctcctacaagacatccttgcttctgcagagaatacaggggaaaatggcatggac
tgccactga
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