Latimeria chalumnae (coelacanth): 102346889
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Entry
102346889 CDS
T02913
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcm01009
]
102346889
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcm03009
]
102346889
Protein phosphatases and associated proteins [BR:
lcm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102346889
Ribosome biogenesis [BR:
lcm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
102346889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop52
DUF1376
Motif
Other DBs
NCBI-GeneID:
102346889
NCBI-ProteinID:
XP_014342490
LinkDB
All DBs
Position
Un
AA seq
749 aa
AA seq
DB search
MSALWNVTGSVSPRATWDVGNIMASPEIQFAQRLASNEKIVRDRALNKLRKYIVAKTRRS
TGGFSHNELLKIWKGLFYCLWMQDKPLLQEELAKNISALTHAFQNEDARELFLQTFFQTM
NHEWNGIDGLRLDKFYMLMRFILRECFEVLKDNQWEERLMKELLSMIMTEVMSARNKAPR
GVKFHFIDIYLQELAKVGAEELTAEQNLLLIDPFCKLAARTKDHLLMQAVIQGIFEQIVD
QSPFAIEEIMKETYHRRDEAEDSVEELLLESKRDKDSTKPVSRQLNGEEEDLSLDGFEDQ
DNPDEIVGPVLQFDYDALAERLLELSRRKSTPAQNRKRLYRVVKKFQDLAEGVFPQDDFP
EDVSTDEDDDEYSRGRRKKRQQKKALDKKEKGKNNNFAFQLEKEKANREEIGAKKKKKKK
KKVRIKGTVSSAVVKDDVTEFVVDCASENGTAENKQACKKEALQVTVAGQREIKMNRKLF
KGDRNIHSSSSSSSDEMSDSSKRGKWGLKKKAKKKDLLVHMEMVEPVVENGHSSVSNAEC
STAQLMRKEKVIKISELKKDSSTPGSCGHQEGGDSDSCATRADQMKCRRIDSEDFVVAKK
RSGTKTKRKIKKEESDSLYFLNTKKQKQVSKLEEDFVKFEKSVEPSPSFYRKPKDSTSSL
SFAKQLSTSDSGSKKVTFGLNRNMTTEFRISDESILLSPEGPSRVAFDPEQKPLHGVLKS
PMTQSTYPKLKKKSVRTLVKRRTSKDFFQ
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctatggaacgtaacaggttcggtcagcccacgtgcgacatgggatgtgggc
aacatcatggcgtctccagagatccagttcgcgcagaggttggcctccaacgagaaaatt
gtccgggaccgagccctaaataaactgaggaaatatatcgtcgctaagactcggagatca
acaggtggattcagtcacaacgagttactaaaaatatggaaaggactattttattgtttg
tggatgcaggataaacctctcttacaggaggaattggcaaaaaatatttctgcgctgacc
cacgctttccagaatgaagatgctcgggagttatttttgcagaccttctttcagaccatg
aaccatgagtggaatggaatagacggactccgtcttgataaattttatatgctcatgcgt
ttcatcctcagagagtgttttgaagtactaaaagacaatcagtgggaagaaaggttgatg
aaagaattgctgagcatgataatgacagaagttatgagcgcaaggaataaggcacctaga
ggagtcaagtttcattttattgatatttatctgcaggagttggctaaagttggagcagag
gagctcactgctgaacagaatctcctgcttattgatccattctgcaagcttgcggcaagg
acaaaagaccacctcttgatgcaagccgtaatacagggcatctttgagcagattgtggac
cagtctccctttgctatagaggagataatgaaagagacgtaccacaggagagatgaggca
gaggattctgttgaagagcttcttttggagagcaaaagagataaagattcaacaaaaccg
gtctcaaggcagttaaatggtgaagaggaggatctgtcactggacggtttcgaagatcag
gacaatccagatgaaatagttggaccggttcttcagtttgactatgacgcacttgctgag
aggctccttgaattgtcaaggaggaagagcacccctgcccagaacaggaagcgtttgtat
agagttgtgaaaaaattccaggacttggctgaaggcgtgttcccacaagatgatttcccc
gaggatgtctctacagatgaagacgatgatgagtatagtcgagggaggagaaagaaaagg
caacagaaaaaagctttggataaaaaggaaaaaggtaagaacaataactttgctttccag
ttagagaaagaaaaagctaaccgtgaggagataggagccaagaagaagaagaaaaagaaa
aagaaagtccgcataaaaggcactgtaagctctgcagtagttaaagatgatgttacagaa
tttgtagtagactgtgcttcagaaaatggaacagcagaaaacaagcaagcatgcaaaaag
gaggcgttacaagttactgttgctggacaaagagagatcaaaatgaatcgtaaacttttt
aaaggtgataggaatattcatagcagtagtagtagtagcagcgatgagatgtcagactca
agtaaacgaggaaagtggggcttgaagaaaaaagctaagaaaaaggacttgctggttcat
atggaaatggtggagccagtggttgaaaacggacacagctctgtgagcaatgctgaatgc
tcgactgcccaactcatgaggaaggaaaaggtgatcaaaatttcagagctgaaaaaggat
agctccactccaggaagttgtggccatcaggaaggaggggactctgactcatgtgccacc
agagctgatcaaatgaaatgcagacgtatagacagtgaagactttgtagttgcaaagaaa
agaagtggcaccaagacaaaaaggaagattaaaaaggaagagagtgacagtttatatttt
ctgaacacaaagaagcagaaacaggtttctaaattggaagaggattttgtgaaatttgag
aaaagtgttgagccatctccatcgttttacagaaaacccaaagatagcacctcatcactg
tcgttcgccaagcagttaagcacatcggattcaggttcaaagaaagtaacatttgggcta
aataggaacatgacaacagagttccgaataagtgatgaaagtatattactaagtccagag
ggaccctctcgagtggcctttgacccggagcagaaacccttgcatggagtgttaaagtct
cccatgacacaatcaacttatccaaaattaaagaagaaatccgttcgtacgctagtcaaa
aggagaacctctaaggacttctttcaataa
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