Latimeria chalumnae (coelacanth): 102347085
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Entry
102347085 CDS
T02913
Symbol
GRIN3B
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04020
Calcium signaling pathway
lcm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102347085 (GRIN3B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102347085 (GRIN3B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102347085 (GRIN3B)
Ion channels [BR:
lcm04040
]
Ligand-gated channels
Glutamate (ionotropic)
102347085 (GRIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
102347085
NCBI-ProteinID:
XP_005996404
Ensembl:
ENSLACG00000015454
LinkDB
All DBs
Position
Un
AA seq
1037 aa
AA seq
DB search
MDFIRRICACIGILHTLISPSHSHPQPCHILARIGHTVRLGALLPTWDRSRYQSALNQSS
LLQSRANALPYNLSLEIIEGTPQGRDPESLFRSVCQSLVVRGVAAFLAFPQSIEEIIQVE
FLSDFLEIPFISILEYGKSFNTKNPYHLQMNMRNSMDSLKELLINVLQTNHWYEITIIVC
QSWDISGFLDFLTNSTTFLLRTVLNLTILDNADIHLHLKEHFEDIKDLPTSILLFSCDDK
WSRLILKMAVESGLTMQDFHWVMGYPLSVEELQTDDLPLGLLAYGEVNKPSIEHYIQDAL
ELITRAISTAVYIRPDLTLIQSMVNCNDKHTEERVSSGQYLSRFMANTSFHGLTGHVYVS
NTSLIHTNHRYHIWNLQRDRFGKPTWVTVGSWENNKIEVEQGFWPTRVQQRRTDGSGSSH
IKLRVVTLVEHPFVFTREADDEGRCPAGQFCLDPHTNDSAVLENLYEELNMENSSIPMEY
KKCCYGYCIDLLEKLAEDLQFEFDLYIVGDGKYGAWKNGRWTGLVGDLLSGAAHMAVTSF
SINSARSRVIDFTSPFFSTSLGILVRTKDTAAPIGAFMWPLHWSMWVGIFVSLHLTALFL
TLYEWKSPFGMTPHGRNRKKVFSYSSALNLCYAILFGRTVSSKTPKCCTGRFLMNLWAIF
CLLVLSSYTANLAAVMVGEKTFEELSGIHDAKLHHPSQGFRFGTVRESSAEDYVKKSFPE
MHEYMRRFNVPATPSGVTTLTTDPPKLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEG
YGIGLPQNSPLTSNISEFISRYKSAGYMDMLHDKWYKVVPCGKRVFAVTETLQMGINHFS
GLFVLLCIGFCGSLLTSAGEHVFYQLILPRIKKKKKFKYWLHTSQKIHRALNMTFEEHKN
SKLVTEKRCNIQRIEQIQRNPVWPNSQAGWNNQRRTPFKDNKRVQFNLETFKSDLVLTSS
EKDPTVHSYENGKPALSPEKNSNETELKELEQRIQLIKEQLRAAITRKNELEACLALPKD
NCQTSTNSQVKERNENR
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggattttatccggcggatctgcgcttgcattgggattctccacactctgatcagcccc
agtcactcacacccccagccctgccacatcctcgcccggatcgggcacacggtgcgtctg
ggtgccctgctgcccacctgggaccgatctcgttatcagagcgccctgaaccagagcagt
cttcttcaatccagggcaaatgccttaccctacaacctgagcctagagatcattgagggc
accccccaaggacgggacccggagtcccttttccgcagcgtctgccagagtttggtggtg
cggggggtcgcagcgtttctggctttcccacagtccatcgaagagatcatccaggtggaa
ttcttgtctgactttctggagatccccttcatcagcatcttggaatatggcaaatccttt
aacacaaagaatccctaccatcttcagatgaatatgaggaactccatggattctttaaag
gagctactcatcaacgttcttcagaccaaccactggtatgagatcactatcattgtgtgc
caaagctgggacatttctggtttcttggattttttaacaaacagtactacttttttgctg
aggacagtgcttaaccttacaattctggacaatgctgatattcatctccacttaaaagag
catttcgaagacataaaggatctacctacttccattttgttgttcagttgtgatgataag
tggtctagacttatcttaaagatggcagtagagtctgggctgacaatgcaggattttcat
tgggtaatgggatacccactgagtgtagaagagctgcaaactgatgaccttcctctaggc
ctgctagcctatggagaagtgaataagccatctattgaacattatattcaagatgccctt
gaactgattactagagccatttcaactgctgtatatatcagaccagacttgactctcatt
cagagtatggtgaactgtaatgacaaacacacagaagaaagagtatcttcaggtcaatat
ctttcaaggtttatggctaacacctctttccatggattaacaggccacgtgtatgtttca
aatacctctctcatccacacaaatcaccgctatcatatatggaatctacagcgtgatcgt
tttggtaagcctacatgggtaactgttggcagctgggaaaataataaaattgaggttgag
caaggtttctggcccaccagagtccagcaaagaaggactgatggcagtggttcttctcac
ataaagttgcgtgtggtaacattggtagaacatccatttgtcttcaccagagaagctgat
gatgaagggagatgtccagcaggacagttttgcttggatcctcacacaaatgattctgct
gtcttggaaaacctttatgaagaactgaacatggaaaacagttcaattccaatggaatac
aaaaagtgctgttatggatactgcatagatctcttggaaaagcttgctgaagatcttcaa
tttgagtttgacttgtatattgttggggatggcaagtatggggcctggaagaatgggcgt
tggactgggttggtaggtgatttactcagcggtgctgcccatatggcagttacatcattt
agcataaactcagcaagaagcagagtcattgacttcacaagccctttcttctctacaagt
ttgggcatccttgtcaggactaaagatacagcagctccaataggtgccttcatgtggcct
ctccactggtcaatgtgggtgggaatttttgtctctcttcacctcactgcccttttttta
acactctatgaatggaaaagtccatttggtatgactcctcacggcaggaaccggaagaag
gtgttttcatactcttcagctctgaatttatgctatgctatcctttttggcaggactgtg
tccagtaagacacccaagtgttgcacagggaggtttttgatgaacctctgggccatattt
tgtttgcttgttctgtcaagttatacagctaatttagcagcagtgatggttggagaaaag
acatttgaagagctttctggcatccatgatgccaagttacaccacccatcccaagggttt
cgatttggaactgtgagggagagcagtgcagaagactatgtaaagaagagttttcctgaa
atgcatgaatatatgagaagattcaatgttccagcaactccaagtggagtaaccacactc
acgactgatcctcccaagttagatgcatttatcatggacaaggctcttttagattatgaa
gtgtccattgatgctgactgtaaattgttaactgtcgggaagccttttgctattgaaggc
tatggaattggtcttcctcagaattctccactaacctccaacatctccgagtttatcagt
cgctacaaatcagcaggatatatggatatgctccatgacaaatggtacaaggtggtgccc
tgcgggaaaagggtttttgctgtaactgagacattacagatgggaataaaccacttctca
ggcctgtttgttttactgtgcattggattctgtgggtcccttttgacatctgctggggaa
catgttttctatcaacttattcttcccaggatcaagaaaaagaaaaaattcaaatactgg
cttcatactagccagaaaattcaccgtgctttaaatatgacctttgaagagcataaaaat
tccaaattagtaacagaaaaaaggtgcaacatacaaagaattgaacagatacagagaaat
ccagtctggcccaacagtcaagcaggatggaacaaccaaaggaggacaccatttaaagac
aataaaagagtacagtttaacttagaaacttttaaaagtgaccttgttttgaccagttca
gaaaaagacccaactgtgcatagttatgagaatggcaaacctgccctatcgcctgagaag
aattccaatgaaactgaacttaaagaactggaacagaggatacagcttattaaagagcag
ctgagagcagcaataactcgtaaaaatgaactggaggcctgtcttgctttacctaaagac
aactgccaaacatccacaaactcacaagtcaaagaaaggaatgaaaacaggtga
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