KEGG   Latimeria chalumnae (coelacanth): 102347136
Entry
102347136         CDS       T02913                                 
Symbol
CAPN1
Name
(RefSeq) calpain 1
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04141  Protein processing in endoplasmic reticulum
lcm04210  Apoptosis
lcm04217  Necroptosis
lcm04218  Cellular senescence
lcm04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102347136 (CAPN1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102347136 (CAPN1)
   04217 Necroptosis
    102347136 (CAPN1)
   04218 Cellular senescence
    102347136 (CAPN1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    102347136 (CAPN1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcm01002]
    102347136 (CAPN1)
Enzymes [BR:lcm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     102347136 (CAPN1)
Peptidases and inhibitors [BR:lcm01002]
 Cysteine peptidases
  Family C2: calpain family
   102347136 (CAPN1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8
Other DBs
NCBI-GeneID: 102347136
NCBI-ProteinID: XP_014354200
LinkDB
Position
Un
AA seq 828 aa
MITPCFFSGVSAQVQKQRDKDLGVGKHENAVKFQGQDYEALQAACLQNRVLFDDEAFPTC
ATALGFKELGPGSQKTRGIQWKRPMEICRNPQFIVDGATRTDICQGALGKDGAFVSDLVY
REVRLLVMPTPTPSGSYLAAAWVKTKIRFSTGMWLNRIDVVSLGAFGSSLESTEKLSGTK
TDHVEEALFSPQLSDCVAFTPSRFWQFGEWVDVVIDDRLPMKDGKLMFVHSAEGNEFWSA
LLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEMYELKKAPKDLYEIIQKALERGSLLG
CSIDITSSCDMEAVTFKKLVKGHAYSVTGANEVQYRGQQVKLVRIRNPWGEVEWTGAWSD
GSGEWSGVNPSVREELRIRMEDGEFWMSFNDFLREFSRLEICNLTPDALKDQKLRKWNTA
NYDGLWRRGSTAGGCRNFPATFWINPQFKIRLDELDDDRGGSGESGCSFLVALMQKDRRK
QRKLGKDMETIGFAIYEVPEECAGQSAVHLKRDFFLTHSSRARSELFINLREVSSRCKLP
PGEYIIVPSTFEPNKEGDFVLRVFSEKTADSEXVLGESTAADNIDESFKNLFRQLAGEDL
EISVRELQTILNRIVSKHKDLKTDGFSLDSCRCMVNLMDKDGNGKLGLVEFNILWGKIRK
YLGVFRKFDLDKSGTMNAYEMRLALESAGNAGFFGGVFSSQRQDRPTPHAAVSWLPPPPS
PNSLPQKGENQPGEPGVDYAHHVLDRLPRSRPLTCKCLRGVGTKAFLPFPLPDMKLRLPA
QKRLAAPPLSCLHTYVIIFNVLEVHCTRRGGSRFEEVQYLTSDWLAEI
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgatcacaccgtgctttttctccggggtgtctgcgcaggtacagaagcagcgggacaag
gacctgggcgtagggaagcacgagaacgcggtgaagttccagggtcaggactacgaggca
ctgcaggcggcctgtctgcagaacagggtcctcttcgatgacgaagcctttcccacttgc
gccactgccctgggattcaaggaactggggccgggctcccagaaaacccgcgggatccag
tggaaaagacctatggaaatttgtcgcaatccccagtttattgttgacggagcgactcgt
acggacatctgtcaaggagctttgggtaaggatggagcttttgtttctgatctggtgtac
cgcgaggtgaggttacttgtcatgcccacacccacgcccagtggaagctatcttgctgca
gcctgggttaagacgaagattaggttctccacaggaatgtggctgaacaggattgacgtc
gttagcttgggggcattcggtagcagcttagaaagcaccgagaaactttcaggaacaaaa
accgatcacgtggaagaggctcttttcagtcctcagttgagcgactgtgttgcttttaca
cctagtcgtttctggcagttcggagagtgggtggacgtggtgattgacgatcgtctcccc
atgaaagatgggaagctgatgttcgttcactcggccgaggggaacgaattttggagtgcg
ctgctggagaaggcctacgcaaaggtaaacggttgctatgaagcgctgtccggcggaagc
acctctgagggctttgaggatttcactggtggggtgactgaaatgtatgaactgaagaag
gcccccaaggacctgtatgagattatccagaaagccctggaaaggggctccttgctcggc
tgttctatcgatatcacaagttcttgcgacatggaggctgtgacatttaagaagttggtc
aaaggtcacgcctactccgtcactggtgccaacgaggtgcagtaccgaggacagcaggtg
aaactggttcggatccgaaacccctggggagaggtggagtggaccggcgcctggagcgac
ggctccggagagtggagcggtgtgaacccctcagtccgggaagagctgcgcattcgaatg
gaggacggagagttctggatgtccttcaacgatttcttgcgtgagtttagccggctggag
atctgtaacttgacgccagacgcgctgaaagaccagaagctgcgcaaatggaacacggcg
aactacgacggactgtggaggcgcggcagcactgcgggcggctgcaggaatttcccagcc
acgttctggattaatccgcaatttaaaatccgattggacgagctggacgatgaccgcggc
ggaagtggtgaatcggggtgcagcttcctggttgcgctgatgcagaaggaccggcgtaag
cagaggaagctgggcaaggacatggagaccatcggctttgcgatctacgaggttcctgaa
gagtgtgcaggacagtccgcggtccacctgaagcgggatttcttcttgacccacagctcc
cgcgcccgttcggagctcttcataaacctgcgtgaggtcagctcgcgatgtaagctcccg
ccgggcgagtacatcatcgtgccctccaccttcgagcccaacaaggaaggagattttgtc
ctgagggtcttctccgagaaaaccgcggattctgagtaagtgttgggggaaagtacagct
gcagacaacatcgacgagagcttcaagaaccttttcagacagcttgctggcgaggatttg
gagatcagcgtccgggaacttcagaccatcctcaacagaatagtctccaaacataaggat
ctgaagactgatggttttagtctggattcctgccgctgtatggtgaacctcatggacaaa
gacggaaatggaaaactggggctcgttgagtttaatatcctttggggaaaaatccgcaag
tatctgggtgttttcaggaagtttgatttggacaaatctggaacaatgaatgcttatgaa
atgcgtcttgctttggagtctgcaggtaatgctggtttttttgggggggttttctcctct
caaagacaggaccgcccaaccccacatgctgccgtctcttggctcccgccccccccctcc
ccgaactccctaccccagaagggggagaaccagcctggggagccgggagtggattatgct
caccatgttctagatcgccttccacgctcgcgccctttgacctgcaagtgccttcgaggt
gttgggactaaggccttccttcctttcccacttccagatatgaaactccgcctccccgca
cagaagcggcttgctgcaccgcccctttcttgcttgcacacctatgtcatcatttttaac
gttttggaggtgcattgtacacgccgtgggggtagcaggtttgaggaagtacagtacctg
acctctgattggctggccgagatttag

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