Latimeria chalumnae (coelacanth): 102347181
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Entry
102347181 CDS
T02913
Symbol
TRIM71
Name
(RefSeq) tripartite motif containing 71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcm03019
]
102347181 (TRIM71)
04121 Ubiquitin system [BR:
lcm04121
]
102347181 (TRIM71)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102347181 (TRIM71)
Messenger RNA biogenesis [BR:
lcm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102347181 (TRIM71)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102347181 (TRIM71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
TEN_NHL
Vgb_lyase
Ig_GEX2_N
Invasin_D3
PspA_IM30
DUF4094
Motif
Other DBs
NCBI-GeneID:
102347181
NCBI-ProteinID:
XP_014346638
LinkDB
All DBs
Position
Un
AA seq
566 aa
AA seq
DB search
MGRHVGHSFIYLQDAIQDSRALTIQLLTDAQQGRQAIQLSIEQAQAVAEQVEMKAKVAQT
EVKAVTSRHKKALEERECELLWKVEKIRQVKTKSLFLQVEKLRQNLNKLDSTISAVQQVL
EEGRNMDILLARDRMLSQVQELKNMRGLLQPQEDDRIMFTPPDQALYLAIKSMGFVSSGA
FAPLTKATGEGLKRALQGKVATFSVVGYDHDGEPRLSGGDMLSVVAMGPDGNLFAAEVTD
QQNGTYVVSYRPQVEGEHLLSVTISNQHIEGSPFKILVKSGRSYVGIGLPILSFGGEGDA
DGKLCRPWGVCVDKEGYIIAADRSNNRIQVFKPCGTFHHKFGALGSRPGQFDRPAGVACD
SSRRIIVADKDNHRIQIFTFEGQFILKFGEKGTKTGQFNYPWDVAVNSEGKILVSDTRNH
RIQLFGPDGGFLNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSAR
FLGSEGTHNAQFLRPQGVAVDQEGRLIVADSRNHRVQIFEPNGNFLCKFGTQGNGFGQMD
RPSGIAVTPDGMIVIVDFGNNRILVF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggacggcacgtgggtcacagctttatctacctccaggatgccattcaggactccaga
gccctcaccatccaattactgactgacgctcagcaaggtcgccaggccattcagctgagt
attgaacaagcccaggctgtagcagagcaggtcgagatgaaggccaaggtcgcccaaacg
gaggtcaaagcggtcacatccaggcacaaaaaggccttagaagagcgtgaatgtgagctg
ctgtggaaggtggagaaaattcgccaggtcaagaccaaatccctctttctgcaagtggag
aagttgcgtcagaacttgaacaagctggatagcacaatcagcgcagttcagcaggtcctg
gaggagggaaggaacatggatattcttctagctcgcgaccgcatgctatctcaggtacaa
gagctgaagaacatgaggggcctccttcagccccaggaagatgaccgcatcatgttcaca
cctccagaccaggccttataccttgccatcaagtccatgggctttgtcagcagcggtgct
tttgcgccgttgacgaaggccactggcgaaggcctgaaacgtgcactgcagggtaaggtt
gccacgttctctgtagttggctacgaccatgacggcgagccccgcctttctggtggcgac
atgctttccgtggtagcgatggggccagatggaaacttgtttgctgcggaggtgactgac
caacagaacggcacctacgtcgtcagctaccggccccaagtggagggtgagcacctcctc
tctgttaccatttccaatcagcatatcgaaggcagcccatttaaaatcctggtcaaatca
gggcgcagttatgtgggcattgggctacccattctttcctttggaggggagggagatgcc
gatggtaagctgtgtcgcccttggggggtgtgtgtggataaagaaggctacatcattgct
gctgatcggagcaataaccgcattcaggtgttcaaaccctgcggcacctttcatcataag
tttggcgccttgggatcccggcctggccagttcgatcggcctgcaggggttgcatgcgat
agctcccgcagaattattgttgcagacaaggacaatcatcgcatccaaattttcactttt
gaagggcagtttatcttgaagtttggagaaaaaggaaccaaaactggacagttcaactac
ccgtgggatgtggcggtcaactccgagggcaaaatcttggtctccgacaccagaaaccat
cgaatccaattgtttgggccagacggggggtttcttaacaagtatggctttgaaggggca
ctctggaagcactttgattctccacggggggtgactttcaaccacgagggccatctggtg
gtgactgactttaacaaccataggcttctagtcatccacccagactgccagtctgcccgt
ttcctaggctcagaaggcacgcacaatgcgcagttcctccgcccgcagggtgtggctgtc
gaccaggagggccgcctcatagttgctgactccaggaaccaccgggtgcagatattcgag
ccgaatggcaactttttatgcaagtttgggactcagggtaacggctttgggcagatggac
cgcccatcaggtatagcagttacccctgacggaatgattgtcattgttgactttggaaac
aatcgtatccttgtgttctag
DBGET
integrated database retrieval system
