Latimeria chalumnae (coelacanth): 102347244
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Entry
102347244 CDS
T02913
Symbol
RNF43
Name
(RefSeq) ring finger protein 43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
102347244 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcm04121
]
102347244 (RNF43)
Enzymes [BR:
lcm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102347244 (RNF43)
Ubiquitin system [BR:
lcm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102347244 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
RPS31
Zn_ribbon_IFT122_C
ECSCR
Motif
Other DBs
NCBI-GeneID:
102347244
NCBI-ProteinID:
XP_014341747
LinkDB
All DBs
Position
Un
AA seq
860 aa
AA seq
DB search
MTVPRRQLAVLWPWLLLMALQAGLGQTGLALAAAVESEKLPPRAVVKVIPLKADPTGKYN
LTLEGVFAGAGDTTSAEGKLLQFHPLSLCNTSEDEQQEDKFVTIVKLESPDRDPSPCLPL
RNKAKLAVQRGAMAVIFDITDDASAADQLFGNSDLPRPVVLIRGKDAELLMDVVNKNREA
KVRIEVKETPADWPGYDMGISITLVIAVLVIVLLIAVRSRCRHNRTQDSLQQQTIRAISR
LEIRKYKSRCKTGGHIHHSGQDSGSSCSSAPVCAICLEEFIEGQDLRIITCFHEFHKECV
DPWLLQHRTCPLCMHNIIEGDAIPRHLSHSRSPTNVEHNQQVHFLRQYPGHAHLYRHTTT
FPTRAYHQSNSRSATAQNPNMGHYFFNPEVYQIDFNTMRYVPYRQVNMAPHRCGYRHNEG
QGVPHRTNPHRRPPPWADQQYLQRTCVPQHRATCLGQQVPQTVKHHSTHSRGVHHGRQED
GSCSGGSFRTERSGYLPDGPGSDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLS
SDYDPFVYCSQGKQNTEKGDDQSLKETRPRSLDSVVNRAGSIPEDQVFSHVHYHHHRHHH
YRDGKQNATRNSKPASGQNFKEGQPMENTEGPNHNTDNIIVPEQRPIRTHHCQLEPECGP
QSQLAPHSGRTPFLSQGDLAEFSVQRGNTQEERSEVNEVLLNGTPLLPCCSEPGCSTNRH
QRRKRSCRHDPSAVYLHQGFDMPEDCSVHIHYGHSASYCCTPEIQPLVPVPLVLDAGIAR
DHSLACCMAPEAVWEKRLIRSGSEPQLQVDREPEENCRLTFQIGLSGTNPTQEDCFYCQT
FQTHQGSEEEVVEDVCEHTV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccccaggcggcagctggctgtcctctggccctggctgctgctgatggcactg
caggcgggccttgggcagactgggctggcgctggcagcagcggtggagtcagagaaattg
ccacccagggctgtggtcaaggtgatccccctaaaagcagacccaacagggaagtacaat
ctaacactggagggggttttcgctggagcgggagacacaacttcagcggaaggcaagttg
ctacagttccaccctctgtctctgtgcaacaccagtgaagatgagcagcaggaagacaag
tttgttactatcgtcaagttggagagtccagatcgggatcccagtccctgcctaccgcta
cgcaacaaggcgaagctggcagtgcaaaggggtgccatggcggtgatctttgacataaca
gacgacgcaagtgctgcagatcagctgtttgggaattcagatctgccccgacccgtggtc
ctaatccgaggcaaggatgctgaactcctgatggatgttgtcaacaaaaaccgggaggca
aaagtgaggattgaggtgaaggagacgccagctgattggcctggttacgacatggggatc
tccatcacattagtgattgcagtcctggtaatcgttttgctcattgcagtccgaagcagg
tgcagacacaaccgaacccaggattccttgcaacagcagacaatccgtgctatcagcagg
ctggagatccgaaagtacaagtcccgttgcaagacagggggtcacatacatcatagtggg
caagattccgggagcagctgcagctctgcccctgtctgtgctatctgtcttgaggagttc
atagaaggacaggatttgcggatcatcacctgttttcatgagttccataaggaatgtgtg
gacccctggctacttcagcatcgaacctgcccgctctgcatgcacaatattatagaggga
gatgcaatcccgagacatttgagccatagtaggagccctaccaatgtggagcataaccag
caagttcactttctgcggcagtaccctggacacgcacatctttacagacacactactact
tttccaacacgggcttatcaccagtccaactccaggtctgctacagcacaaaaccccaac
atgggacattacttctttaacccagaagtctatcagatagacttcaacaccatgaggtac
gtaccttacaggcaggtaaatatggcacctcatcggtgtggctaccgccacaatgaagga
caaggggttccacacaggactaatcctcatcggaggcctcctccctgggctgatcagcag
tatcttcagaggacatgtgtgcctcagcatcgagccacttgcctgggccaacaggtacct
cagactgtaaagcatcacagtacccattcccggggagtacaccatgggaggcaggaggat
ggcagctgctcagggggcagctttcggactgaacgcagcgggtacctgcctgatggtcct
ggcagtgactctagctcagggccttgccatggctcttccagtgactctgttttgaactgc
acagatgtcagccttcaaggggtttatggcagctggtcaaccttccgtagttccttgagc
agtgactatgacccttttgtgtactgcagccaggggaagcaaaacacagagaaaggagat
gaccagtctttaaaggagacaaggccaaggtccttggactctgtggtaaacagggctgga
tctataccagaggatcaagtttttagccatgtccactatcaccatcatagacaccatcac
tacagggatggtaagcagaatgcaaccaggaattccaaaccagcatctggtcagaacttc
aaagaaggtcagcccatggagaacacagagggcccaaatcataatacagataatattatt
gtgccagaacagagacccattagaactcatcactgccagcttgaacctgaatgtggtcct
caatcccagcttgcacctcactcaggaagaaccccctttttaagtcagggtgaccttgca
gagttttctgttcaaagagggaatacgcaagaagaaaggagtgaggtgaatgaggtgcta
cttaatggcacgcctctgttgccatgttgttcagaaccgggatgcagcactaaccggcac
cagagaagaaaacgaagttgccgacatgacccctcggcagtttacctccatcaaggcttt
gatatgccagaggactgtagcgttcacatacattatggacattctgccagctactgctgc
accccagaaattcaaccattggtgccagtccctttggtcctggacgctgggattgccaga
gaccactcactggcttgctgcatggctccagaagcagtttgggagaaacggctcatccgg
tcaggatcagagccccagctgcaggtggacagagagccagaggagaactgtagactgaca
tttcaaattggactatcaggaacaaatcccacccaagaagactgtttctattgccaaact
ttccagactcatcagggatcagaagaggaggtggtggaggatgtgtgtgagcacacagta
taa
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