KEGG   Latimeria chalumnae (coelacanth): 102347300
Entry
102347300         CDS       T02913                                 
Symbol
RIF1
Name
(RefSeq) replication timing regulatory factor 1
  KO
K11138  telomere-associated protein RIF1
Organism
lcm  Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcm03032]
    102347300 (RIF1)
DNA replication proteins [BR:lcm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    102347300 (RIF1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 102347300
NCBI-ProteinID: XP_006009799
Ensembl: ENSLACG00000005425
LinkDB
Position
Un
AA seq 2397 aa
MAASGPADSNLLPLLETLEDSSASTAEQTDAYLTIANRLSGEEGKQFVAVVEKHFSRLCK
TFKGNISSGNLELSNAALQALGFCVFHSNVASGLAASEVEELLSVLSSIAAVTSDKNTCT
RALWVISKQSFSPEVVGKKVPSIVSTVETLITKGDVQSLVIEHEALNVVIRLLEQTPIQM
REDAVRWAKVVIPLVVHSAHKVRLKAATALEMGMPLLLQKQQEVASITEQLMTTKLIPEL
QKLFSTKNETFVLKLWPLFVRLLGKSLHRGGSFINSLLHLEELGFRSGSPVVKKIAFIAW
KSLIDNFALNPDILCSSKRLRLLMQPLSSIHVRTEAMALTKLEVWWYLIIRLGAQLPVNF
EQVCIPLLQYTLGTEANLALTGTPARMLANQTIMTPGSGQKTGSFLVGSPGNLKLNLSLS
VNGTSSLQVLGIEMLFHFFLGPEVTTFAKQHRLQLSLEPLQQPLINSPSFFCKHAVILIS
AVRDGFIAVGKDTSDAMLIVIWKDLISYAKISIEAGNKERQASEVLTLLLQALEQIVKSE
DFPAERKLALIECTVKGLPQKVLGSPAYQVANMDILNGTPALFLILLLFHGNLLECCVTD
ERYFLNLETLVGYVLSGPTSPLALSEAVLNAISQNASLLDSKEHLWRMWSVVVNPLTERI
SQTNEVNQGDALEHNFSAMYSALTLPISHLFSAKGFPQPTMKSLLKTWSELYRVFARCAA
LVATADENVCCEELCAKILPMLDNEVLLNLSSLDAVVHILTLMAECINFSPYNTKCQLKT
KSPQTPTYWSKKKREPLGNLTAFFKLLSKSMDSFHVLSLRDGPSEMPASAIISIGSSIIS
IVSSIFSHLSSAIVIQTAFANLSKPLVSFYENASKSAADELKVYNALSNKLEKLWGDILL
CFQSRYTGAYDSELLELLSPLLSVMFLHKSKSIRNQTAQFWNATFAKATTLVYPQTLKPI
LSQVKQKVPLMLPGFETIEVAEDSSGPYSDVSESSQLGTKISGMEIKSAGKRDSLLARAA
ELNEKKTSFQATPAKLKLEFSSPMKTSRELLLEEEKSVDFVFIPPEPKQRVLTEHQKEVL
RTKSVDIPVMYNNLDASQDTTLFSQSTQSQELVEKPIVEMGKDDDETIPEQGVKMDTDDL
PSKTQITVEMTTSSRSFDESITIETEERENDIAKENSKDKSSKDEPEIPAEVFQNDITNE
DSANGSGNSESSEVISGTPQKPSSRRQSFITLEKFNTSESRSFSPSALSKFARKSASNVL
QPDSQNMVDSEDQQMKEMNNSEELHTCTLQTPLESIADRETKRLSCRQSRDAQSDNTLSD
SLTITENESSREPIAVFQAAQDDEGSKSEECIPVSQSRIKKNEPGPEKQNQESMGDVNEK
TCKATATDAKENIIPEEVASDSIEVGKPVSQRSLNLKGPRRSSRRRSDVTGTTVDSVDKE
EKSKSKDKLWDTTEKTNQRNSSQTEDALLEKKKALPENKSLDSQTNNEEQEKHQRITEKA
KVKEEKSSRKKISRAEGGAVGALNQVADHIKTSFRTGDSLSQDSFSDKESQDSGKGRPRY
HTRRSSQGLFSGMEDAQSDSSDIKEDGPKRKRKGRNNLTKSSANKEAEDLEDRSEGKLSA
ESGDIVRKENTDDEMESKSQSESDKDIVVSQELENSKNRTYTSINESLGASDINEISAEE
PNIGQENKTYTDEGSFSRTVVAHQIVETWQNNITYPITSVTTELSNDTASLPTEPLVEDY
STATSDVCLPSEKSSLASKCQHKRSKRVRRSKNCDCCGELSQQQVKPFTELKDSKVNDAK
KTPLQLARAALENFVDAQLDDSVFVEPCAISTPLTTHRKLDFFRSSISELRTQNELEEET
DSNQINGCDDELNRICPKSETDQIPTNQEEPMEQGDKTEQLEGIEKGLEKQDSETVEQSA
STERELDKQDDPAEQRLTTENELEDQGDKAVELSVTTEREPEEKIDDSTSVVVEQRLAVS
TVVVELEQKDQVCQVVDGQEIDIVHGEMGTDQVQENAEKMSEILEVHLPVSIGVETLEVP
TEDHGKYVVSGNIAVTKQAKEEANGDSPQKHKLFDAALIEVNQSPSGMQPRCVWSPSASP
STSILKKGIKRQVENDSPSPVNKIRRVSFADPIYQEGLADDIDRRSPVVRTSSSNSSPTS
KSHRSSSNLQGKHITTPPKGFLSPSSRGQRFKSSKKCLISEMSKEPASSVQESVYPALMG
CTAPVDIILPQITSNLWARGVGQLVRAKNIKTVGDLCALTAAEIKTLPVRSPKVSTVKRA
LRVYHEQQMKSRSLEEHTALDDIEKSMNGLEDEPCPVNGEEEKLATDLLESPTPVAKTST
DLWADINALALRFTSEDLNEFSGSQLFAMQEKLSTMMNCIMGTLQSRWRSPPHEPSA
NT seq 7194 nt   +upstreamnt  +downstreamnt
atggctgcttctggcccagcagactccaatctgttgcccctgttggaaactttagaagat
tcttctgcatcaacagcagaacagactgatgcttatctaactattgcaaaccgcctgagc
ggagaagaaggcaaacagtttgttgcagtggttgagaaacacttctctcgtctctgcaaa
acatttaagggaaacatttcatctgggaacttggaactgagcaatgctgcactacaggcc
ttggggttctgtgtgtttcacagtaatgttgcatcaggtttggcagcaagtgaagtagaa
gaattgctttcagttctgagcagcatcgctgctgtaacctctgacaagaacacttgtaca
cgagcgctttgggtgatttcaaagcagagtttctcgccagaggtagttgggaagaaggta
cctagtatagttagcacagttgaaacactaatcactaaaggcgatgtccagtctttggtt
attgaacatgaagcgttgaatgttgttataagattattggagcagactccaatccagatg
agagaagatgctgttaggtgggcaaaggtggtcattccactggtggtgcattcagcacac
aaagtcaggttaaaggcagcaacagctctggaaatgggaatgcccctcttacttcagaag
cagcaagaggtagctagcatcactgaacaattaatgaccacgaaattaattccagagttg
caaaaattgttttccaccaaaaatgagacctttgtactgaaattgtggcccctttttgtg
aggctacttgggaagtctttgcatcgtggcgggagtttcatcaactctttgttacacttg
gaagaacttggatttcgtagtggctcaccagttgtgaagaagatagcttttatagcatgg
aaaagccttattgacaattttgctttaaatccagatattctgtgtagcagtaagagacta
aggttattaatgcagccactaagctctatccatgtgagaactgaggctatggcattgaca
aagttggaggtgtggtggtacttaataataagacttggggcacaacttcctgttaacttt
gaacaggtctgcattccactactccaatacacattaggtacagaggcaaatttagcactt
acaggaactcctgcaagaatgctagcaaatcaaaccatcatgacaccaggctctgggcaa
aaaacaggatcatttttagttggaagtccaggcaacctaaaattaaacctgagtcttagt
gtgaatgggacctcgtctctccaggttttggggattgaaatgttgtttcacttttttctg
ggcccagaagtcacaacctttgctaaacaacacagacttcaacttagtttagagcctctg
cagcagccgctgatcaacagtccctcatttttctgcaagcatgctgtcattctaataagt
gctgtgagagatggatttattgcagttggtaaagacacttcagatgccatgctaattgta
atttggaaggatcttatcagttatgcgaagatttctattgaagctggtaataaagagcgg
caagcttctgaagtgttgacactgctactacaggcattggagcaaattgttaagtccgag
gattttcctgcagagagaaagctggctcttattgaatgcacagttaaggggctacctcag
aaagtactaggatcaccggcataccaagtggccaacatggacattcttaatggaactcct
gctttgttcttgattcttctgcttttccatggtaatcttttagaatgctgtgttacagat
gagaggtatttcctgaacttggaaacacttgttggctatgttctatcaggacccacatct
ccactggctttgagtgaggcagtcttgaatgctattagccagaatgcttcactgctggac
agcaaggaacatttgtggaggatgtggagtgtggtcgtgaaccctttaactgagcggatt
agtcagaccaatgaagtaaatcaaggagatgcgctggagcataacttcagtgctatgtat
agtgcactaacattacccatcagccatctcttttctgcaaaggggttcccacagcccaca
atgaaatctttgctgaaaacctggtcagagttgtacagagtgtttgcccgttgtgctgct
ctggtagctacagctgatgagaatgtgtgctgtgaggagttgtgtgctaaaattctacct
atgcttgataatgaggtgttattgaacctatcctcactggatgctgtagttcacatctta
acacttatggcagagtgcatcaatttttcaccatacaacactaaatgccagctgaaaact
aaatcaccacagactccaacttactggtctaagaagaagcgagaacccctggggaaccta
actgctttttttaaactcttgtcaaaatctatggattccttccatgtgctcagtttaaga
gatgggccatcagaaatgcctgcatctgccatcatttctattggaagctctattattagc
attgtatccagtatcttcagccacttgtcctcggctatagtgatccaaactgcatttgct
aatctgtcaaaaccccttgtgagcttttatgagaacgcttcaaagtcagctgcagatgag
ctaaaggtttataatgcacttagcaacaagctggagaaactgtggggagacattctgctt
tgttttcaatcccgctacactggtgcttatgacagtgaactgttagaactgctttctcca
ttactgagtgtgatgtttttacacaagagtaaatcaattcgcaaccagacagcccagttc
tggaatgccacatttgctaaagccacaacactagtctatccccagacactaaagcccata
ctaagtcaagttaagcaaaaagttccactaatgcttcctggctttgaaaccattgaagta
gcagaggactccagtgggccttactctgatgtttcggaaagttctcagttaggcacaaaa
ataagtggaatggaaatcaagtcagctggaaaacgtgattcactcttggcacgagctgca
gagctcaatgaaaagaagacttcatttcaagcaaccccagctaaattaaagttagaattt
tcttctccgatgaaaaccagtcgtgagctgctgttggaagaggagaaatcagtagatttt
gtctttatacctcctgagccaaaacagagagtattgacagaacatcagaaagaagtgctt
aggactaagagcgtagatattcctgtcatgtataataacttagatgcatctcaagatacc
acactgttttctcaatcaacacagagccaagaacttgtagagaaacctatagtggagatg
ggaaaggatgatgatgaaactataccagagcaaggggtaaaaatggacacagatgaccta
cctagtaaaacacagattactgtggagatgaccacttccagcagatcatttgatgaatct
ataactatagaaactgaagagagagaaaatgatattgctaaagaaaattccaaagataag
tccagtaaagatgaaccagaaatacctgctgaagtattccaaaatgacataacaaatgaa
gatagtgcaaatggtagtggcaactcggagtcatcagaagtcatctctggaactccacaa
aagccttccagcaggcgacagtcttttataacactggagaaatttaacacttcagaaagc
cgttcttttagcccttctgcgttgagtaaatttgcaagaaagtctgcttctaatgtactg
cagccagatagccagaatatggtggatagtgaagaccaacaaatgaaggaaatgaataat
tcagaagagctgcacacttgtactttacagactccattagaaagcattgcagatagagag
actaaaaggttatcgtgtcggcaaagtagagatgcacaaagtgacaacacactttcagat
tcattaacaataacagaaaatgagagttcacgggaacctattgctgtttttcaagctgca
caggatgatgagggaagtaagagtgaagagtgcatccctgtcagtcagtcccgtattaaa
aaaaatgaacctgggcctgagaagcaaaaccaagaaagtatgggtgatgtgaatgaaaaa
acctgtaaagctactgctacggatgcaaaagagaatataattcctgaagaagttgcgagt
gacagtatagaagttggtaagccagtatctcagaggtcacttaatctgaagggaccaaga
cgttcttcaagacgacgatcagatgttacagggactactgtggacagtgtagacaaggaa
gaaaaaagcaaatcaaaagacaagctatgggatacaactgaaaaaactaaccaaagaaat
tcctcacaaacagaggatgccttactagagaaaaaaaaagcattgccagaaaacaagtct
ttagatagccaaacaaacaatgaggaacaggaaaaacatcagcgtataactgaaaaggct
aaagtaaaagaggaaaagtcaagtcggaagaaaatctcccgtgctgaaggtggtgcagtg
ggtgcattgaatcaagttgcagaccatattaaaacctcattccgaactggagactccctt
tcacaagactccttttcagataaagaaagtcaagactctggaaaaggtagaccaagatac
catactcggagatcatcacagggtttgttttctggcatggaagatgcacagtctgacagt
tcagatatcaaggaagatggtccaaaaaggaaaagaaaaggtagaaataatttaactaaa
tcttctgcaaacaaagaggcagaagaccttgaagatcgaagtgaagggaagttgtcagca
gaaagtggtgacatagtaagaaaagagaatacagatgatgaaatggaaagcaaatcacaa
tctgaaagtgacaaagatatagtggtctcacaggagcttgaaaatagcaaaaataggact
tacaccagtattaatgagtcattgggggcatcagatattaatgagatttcagcagaggaa
ccaaatataggtcaagaaaacaaaacctacactgatgaaggctcattttccaggactgta
gttgcacatcaaattgtagaaacttggcaaaataatataacctatccaattacaagtgtt
accacagaactttctaatgacacagctagcttacctactgagcctttagttgaggactat
tcaacagctacttctgatgtctgtcttccttcagaaaaaagttcacttgcctctaagtgt
cagcataagaggagcaagagggtaaggcgatctaagaactgtgattgctgtggtgaattg
tctcaacagcaagtaaaaccctttacagaattaaaagattcaaaagttaatgatgcaaaa
aaaactcctttgcaacttgctcgagcagctttagaaaattttgttgacgcccaattagat
gatagtgtgtttgtagagccttgtgctataagcactccattaactactcacagaaaatta
gatttctttagatcttccattagtgagttgagaactcaaaatgaattggaagaagaaact
gattctaatcaaataaatgggtgtgatgatgaacttaatcggatttgtcccaaaagtgaa
acggaccaaataccaactaaccaagaagagccaatggaacaaggtgataaaactgaacag
cttgaaggaattgagaaagggttggagaaacaagatagtgaaacagttgaacagtctgca
tcaacagagagagagttagacaagcaagacgatccagctgaacagcgtttaacaactgag
aatgagttggaagaccaaggtgataaagcagttgagctgtctgtaacaactgaaagagag
ccggaagagaaaatagatgactctaccagtgtggttgttgaacaaagacttgcagtttct
acagttgtggtggagctagaacagaaagatcaagtttgccaggtggttgatggacaagaa
attgatattgtacatggagaaatgggcactgaccaagttcaagaaaatgctgaaaaaatg
tcagaaatccttgaagtgcatcttccagtaagcattggtgtagagaccttagaagtacca
acagaggatcatggtaaatatgtggtttctgggaatattgctgtaactaaacaagcaaaa
gaggaagctaatggtgattctcctcagaaacacaaactatttgatgcagctcttattgag
gttaatcagagccctagtggaatgcagccacgttgtgtctggtcaccttcagcatctcca
tctacaagtatcctaaagaagggaataaaaaggcaggtggaaaatgactcaccttcacct
gtaaacaagattcgcagagtttcttttgcagaccccatttatcaggaaggactagcagat
gacatcgacaggcgaagccctgttgttagaacttcatcctcaaatagctctccaacttct
aaaagccatagaagttcatctaacctgcaaggaaagcatataaccactccgccgaaagga
tttctgtctcccagctcacgtggccagagattcaagagctctaaaaagtgcctgatttca
gaaatgagcaaagagccagcttcatctgtacaagagagtgtatatcctgccctaatgggt
tgcacagcaccggttgatatcatcctccctcaaatcacttcaaacctgtgggcgagaggt
gtgggacagcttgtaagagccaaaaatatcaagacagttggtgatctatgtgctctcaca
gccgctgaaattaaaactcttccagttcgttctccaaaagtctctactgtgaaaagagcc
cttcgagtgtatcatgagcaacagatgaaatcccgtagtctagaagagcatacagctctg
gatgacattgaaaagtcaatgaatggcttggaagatgaaccctgtcctgtcaatggtgaa
gaggagaaacttgccacagatttgcttgaaagtcccactcctgttgcaaagacctccact
gatctttgggcagacattaatgcactggctttacgattcacttcagaagaccttaatgaa
ttctcgggaagtcaactttttgcaatgcaagagaagcttagtactatgatgaactgtatc
atgggaactctgcagtcccgctggaggtctccacctcatgaaccttctgcttga

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