Latimeria chalumnae (coelacanth): 102347303 Help Entry 102347303         CDS       T02913                                  Symbol NUP98 Name (RefSeq) nucleoporin 98   KO K14297   nuclear pore complex protein Nup98-Nup96 Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:lcm00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     102347303 (NUP98)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lcm03019]     102347303 (NUP98)    03036 Chromosome and associated proteins [BR:lcm03036]     102347303 (NUP98) Messenger RNA biogenesis [BR:lcm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      102347303 (NUP98) Chromosome and associated proteins [BR:lcm03036]  Eukaryotic type   Centrosome formation proteins    Spindle formation proteins     102347303 (NUP98) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Nup96 Nucleoporin2 Nup98_GLEBS Nucleoporin_FG Motif Other DBs NCBI-GeneID:  102347303 NCBI-ProteinID:  XP_014352655 LinkDB All DBs Position Un AA seq 1580 aa AA seqDB search MFNKSFGTPFGGGTGGFGTSSTFGQNTGFGTATGGFGSTAFGSNSNTGLFGNTQSKPGGL FGSSSFTQPATSSTSTGFGFGASSGTSNSLFGSSTAGGGLFSSQNNAFSQNKPGGFGTFG TSTSSGGLFGTTSTASNPFGGTTGSLFGSTGFGSTTNGTTIKFNPPTGTDTMVKGGVSTN ISTKHQCITAMKEYENKSLEELRLEDYQSGRKGPQNPMGAGGTAAGGLFGAAAAPTSTAA GLFGAANTNTGFSYGQKAGFGTTTGGFGAATGGLFGQQPQPSTSLFSKPFGQATTTQNTG FSFGNTNTMGQANTSSVGLFGSTPASQPGGIFGTSTNTSTGTGFGTATGLFGQNATGFGA LGTSSLFGNKPAGFGTTTTSAPSFGTTGGGLFGFSGNTLGGGLFGNKPAAGTLGAGLGAG FGTALGAGQTLLFGNNQPKLGGTLGAGSFGAPGFNTAATGLGFGGLQMPVGKDQESNLCL GHSPGIVLTRVGYYTIPSMEELGQMTTESGRCILENFTIGRRGYGSIFFPGEVDLTGLNL DEIVHIRRKEVIVYLDDEKKPPVGEGLNRRAEVTLDGIWPTDKTTRELITSPERLREMNY EERLENSSRKQGARFREYRPETGSWVFEVVHFSKYGLQDSDEEDELPSKVDAKKQKTVPV PLAGPQVPQQAALSKVAAPIQSPSVEQLRRVTELDSDMADITQEPFPDNLTEEEFSMEEQ EAQGPLSASAHIASTMGINPHTLQIMKASLFVEEYEDEETDMIPEQRFARFSQRMEDHQE VASPKLHFFPAQLQKSRPSAGGLLQPKFPGLSFLRAPGAVESRAGRGSQRPSLPGEATTL SPWSVPPHAFTSAFIMPSPAPEVALKTVGARRQQGLVPMERSVTLGKGKLLMDMALFMGR SFRVGWGPNWTLAHSGDVLSGSAEMEEDQDADSMGYGFLPKPVRAKQLSDAGFKVQVECV SLAQGKRDVDCQLYTTPLQIELKHSTVDAKQPCPLIVPDKGVDALHEYADWIREIAKEPI ETEAVVRHWQLVWTLCEALWGRLHKLGLEVEERGGYAQVLERRLAFSLWLSDMAAEKIER EVACSSQSSHVEAVFSCLTGRRIDEACKLAQCAGDHRLALLLSQAAGSQPARGLLAMQLV DWNSLQADSFIQEDRLRIFVLLAGIPVWQSSDGDINVCSELDWKRCLGLHLWYLLPPTAS IADALRLYEDSFQGSSGCQKYACPPLPPYLEDSGVGLEEELEDELQKGKRPLRDVGFHLL KLYSDRHHDLQQLLDPSTVTSDPLDYRLNWHLWMVLQALNYTHLSEQRQGLLHASYAAQL ESAGLWEWAVFVMLHNPDTRVRTRAVQELLTRHCRLFETPESQKKEDFLTGQLCVPAEWI HKAKATRARWEGNSHKEALHLFRAGHWNQCHKLVVAHLASDAIISENYGYLKEFLESLSP PERCSLIQDWDTAGLVYLDYIWVIESLDRIQQVEPPRYELERLHTKVTSLCNRIELIPCR TAKDRLAQSDMAKRIANILRVVLSLQHTPEPTLDSAPNDHRVPLRLLAPHIGRLPLPEDY ALEELRGLTQSYLRELIVSQ NT seq 4743 nt NT seq  +upstreamnt  +downstreamnt atgtttaataagtcgtttggaaccccctttggagggggtactggagggtttgggacctcc tcaacgtttgggcaaaatactggatttggtactgcaacaggaggatttgggtccacagcc tttggatcaaatagtaatacaggactctttggaaacacacagagcaaaccaggggggctg tttggttcgagttcctttacccagcccgccacttcctctactagcacggggtttggcttt ggggcatcgtctgggacgtccaacagcttattcgggagtagcactgctggagggggactc ttctcatcacagaacaatgctttcagccagaacaagcctggtggctttggcacctttggc accagtaccagcagtggagggctgtttggaacaaccagcaccgcctccaaccccttcggt ggtaccacgggttctctctttggatcgactgggtttgggtctacgacgaatggaaccaca atcaagttcaatcctccgacggggacggacacgatggtcaaaggtggcgtgagcaccaac atcagcaccaaacatcagtgcatcacggcgatgaaagagtacgagaacaagtccctggag gagctgcgtctagaggattaccagtcgggcaggaagggccctcagaatcccatgggggct ggaggcactgctgccggcggattgtttggcgcagccgccgcaccgactagtacggccgct ggtctcttcggagccgccaataccaacactggcttctcgtatggacagaaggctggcttt ggaactactacaggtgggttcggagccgccacggggggcctgtttggccagcagccccag ccgagcacgagcctcttcagcaagccttttggtcaggcgacaaccacgcagaacactggc ttctccttcggaaacaccaacaccatgggacaggcaaacaccagcagtgtgggtttgttt gggagtaccccagcctctcagcctggagggattttcggcacctcgaccaacaccagcact gggacagggtttggcacggccaccggcctctttggacagaacgccactggattcggcgcc cttggcacctcgagcttgtttggcaacaaaccagcaggattcggcactaccacgaccagc gcaccttcgttcggtaccactggtggcgggctctttggctttagtgggaacactcttggc ggtggcctgtttggaaacaagccagccgctggaaccttgggagctgggctgggagccgga tttggaacagctctgggtgcgggacagacgttgctgtttgggaacaaccagcccaagctg ggaggaactctgggggcagggagtttcggagcgcctggattcaacactgccgccacgggc ttgggattcgggggtcttcagatgcctgtgggtaaggatcaggagagtaacttgtgtttg ggccattctccaggcattgtactgacgagggtcggttactacaccatcccctccatggaa gagctgggtcagatgaccactgagagtgggaggtgcatcctggagaacttcaccattgga cggagaggctatgggtcaatatttttccctggcgaggtggatctaactggtctgaacctg gatgagattgttcatatccgcaggaaggaggtaatcgtgtacctggatgatgagaagaaa ccccccgtgggcgaaggcctaaacaggcgtgctgaggtgaccctggacggaatctggcca acagataagacgacccgcgagctgatcacaagccccgagcgcctgagggagatgaactac gaggagcggctggagaactcgtcccgcaagcagggggctcgctttcgggagtacaggccc gagactggctcctgggtctttgaggttgtccacttttccaagtacgggctgcaggactcc gatgaggaggatgagctgccatccaaagtggatgcgaagaaacagaagacggtgcccgtc ccccttgcgggaccgcaagtgccccagcaggcagccttaagcaaagtagctgctcccatt cagagcccgtccgtggagcagctgaggagggtgaccgagctggacagtgacatggcagac atcacgcaggagccgtttccggataacctgaccgaggaggagttcagcatggaagagcag gaagcacaggggcctttgtccgcttctgcccacatcgcttctaccatggggatcaaccct cacaccctacagataatgaaggcctctctgtttgtggaggaatacgaggacgaggaaacg gacatgattccagagcagcggttcgcccgcttctctcaaagaatggaggatcaccaggag gtggcatcgccgaagcttcacttcttccccgcccagctccagaagagccgtccctcagct ggtggattgctgcaaccaaaattccctggcctttccttcctacgggcgcccggtgcggtg gagtctcgagcagggcggggctcccagaggccctctttgcctggcgaagccaccactctc tccccctggtccgtgccaccccatgctttcacctctgctttcatcatgccttccccggcc cctgaggtggcactgaagacggtaggggctcgccggcagcaaggcttggttccgatggag aggtcggtcaccctgggaaagggcaagctcctcatggacatggcgctcttcatgggccgc tctttccgggtgggttggggccccaactggactctggcccacagcggggacgtgctgagc ggatctgccgagatggaggaagatcaggatgcggactccatgggctacggattcctaccc aaacctgttcgagcaaaacagctttctgacgcggggtttaaagtgcaagtggagtgcgtg agcctggcccaggggaagcgggatgtggactgccagctatacacgaccccgctgcagatc gagctcaagcacagcactgtcgacgccaagcagccctgccccctgatcgtgcctgataaa ggggtggacgcgcttcatgagtatgctgattggatccgagagattgcgaaagaacctatt gaaacagaagctgtggtgaggcattggcagctggtgtggacgctgtgcgaagctctctgg ggtcggctccacaagctgggtctggaggtggaggagcgcggcgggtacgcccaggttctg gagcggaggctggcgttctcgctctggctttcggacatggctgccgagaagatcgaaaga gaggtggcgtgctcttcacagagtagccacgtggaggcagtgttcagctgtttgaccggg agacgaatcgatgaggcttgcaagttagctcagtgtgcaggagaccaccgtttggctctg ctgttgtcccaggctgccggcagccaacccgcaagaggtctgctggctatgcagctggtg gactggaacagtctccaggcggacagcttcatccaggaggaccgtttgcggatattcgtc ctgctggctggcataccggtttggcagtcctcagatggtgacatcaatgtatgctcagag ctggactggaaacggtgtctgggcctccacctgtggtacctgctgcctcccactgcatcc attgctgatgccctcaggctgtacgaggattctttccagggcagctcgggatgtcagaaa tatgcgtgtccccctctgcccccgtacctggaggattctggggtcggcctagaggaggag ttggaggacgagctgcagaaggggaagcggcccctgcgagacgtgggcttccatctgttg aaactgtacagcgacagacaccatgacctccagcagcttcttgaccccagcactgtgacc tccgaccccttggattaccggctgaactggcacctgtggatggtgctgcaagcgctgaac tacacccacctgtcagagcagcggcaggggctgctccatgccagttacgctgcgcagctg gagagcgccggactctgggaatgggccgtcttcgtcatgcttcataaccctgacacacgg gttcgtacgagagcggtccaagagctcttgactcgtcactgtcgactctttgagaccccc gagtcccagaagaaggaggacttcctgaccgggcagctttgcgtcccagccgagtggatc cacaaggcgaaggccacgcgggcgaggtgggagggcaacagtcacaaggaggccctacat ctcttcagagcagggcactggaaccagtgccacaagctggtcgtcgctcacctggcatca gatgctataatcagtgagaactacggttacctgaaggagttcctggagagtctgtcccca ccagaacgctgctccctgatccaggattgggacacggcgggcctggtctacctggattat atctgggtcattgagagtctcgacaggattcagcaggtggaaccccctcgctatgagctg gagaggttacacaccaaagtgacgtccctctgcaacaggattgagctcataccatgccgc accgccaaggaccgacttgcacagtccgacatggccaagcgtatcgctaacattttgcgg gtagtgttgagcctacagcacacccccgagcctacgctggactccgccccgaacgatcac agagtacccctgcggctcctggcccctcacatcggccggctgcccctgcctgaggactac gccctggaggaactccgtggactcacccagtcatacttacgagaattgatagtcagtcaa tga

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