Latimeria chalumnae (coelacanth): 102347508
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Entry
102347508 CDS
T02913
Name
(RefSeq) GDNF-inducible zinc finger protein 1-like
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcm03000
]
102347508
Transcription factors [BR:
lcm03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
102347508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
BTB
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_15
C2CH-3rd_BIRD-IDD
BTB_KLHL33
zf-C2H2_6
DUF7066
zf-C2H2_11
Zf-C2H2_ZNF451_C
BTB_BTBDG
Motif
Other DBs
NCBI-GeneID:
102347508
NCBI-ProteinID:
XP_005991178
LinkDB
All DBs
Position
Un
AA seq
1454 aa
AA seq
DB search
MMENHVVLLESESSPKNLLNEMHNLRLAGFLCDVVVHVEHHGVKEEFIAHKAMLAASSMY
FKEAFLSEKAGDSLSTSVYLKEVYAVDFASYLEFIYTAKVEVEEERIHRMLEVAEKLQCS
DLAETCSQVKKQIFESVLIELQNFSEAQETDVGNDLLYNNCSLSEPQNLVEEQTSLITSS
AEFVNNKDTNKTELQTSTVVMKPKQKSKKKKEVVRLLYAKTRKSSGRLTGCKVFVEIPKK
KYTQKLQEEQKKVAEEDCGGKSSIKSQDILDVEMEAEQTEIAIKPELKEDLNNGEKDSKV
SDFEFEEDCDKTKKRESKKKKDTLNSEVLNENSFPEDKKQSHGNTAEVIYRCGTCNQTFS
NRSNLKRHQRHVHSSKDSFPDDLSGKKVERKKNVKRQLLEVHEGGGEYHLCQLCGKGLSS
KSALRRHERMHTGEKPYGCTECEAKFSQPSALKTHIRTHTGEKPFVCDECGARYTQKHML
LHHKRCHTGERPFMCETCGKSFVSKEYLKHHNRIHTGSKPFKCGVCSRTFVQRNSLSQHV
KVHTGERPYCCDQCGKRFTQLSALQRHHRIHTGEKPFMCNACGRTFTDKSTLRRHTPIHD
KSTPWKSFLVIVDGASKKSQEGGSEHQEENGENKVDVFSKAQENLPSGSKTSNYQTLTSV
EESLTVLPENHSSSNLDTKTEGAVLSQEVLIAMTLSDLTVLHTQTHSVQPHLQVIVNAEQ
RSLRKTVMENHVVLLESKSSPKNLLNEMHNLRLAGLFCDVVVHVEHHGVKEEFIAHKAML
AASSMYFKEAFLSEKTGDSLSTSVYLKEVYAADFASYLEFTYTAKVEVKEERIHRMLEVA
EKLQCSDLAETCSQVKKQIFESVLIELQNFSEAQETDIGNGLLHNNCSVSEPEHPVEEQN
SLNTSSAEFVKDQDASDTNKTVLKTSILSKKFKQKSERRKELLKPLYTKTRRASGRLAGR
RVYIQILKKRYTRKLQEQQKKAEEEIVRKSTRKGQDVLDVEMEAGQTVVSLKPEEKEDLH
NEDIDNDCDLGLEEDLKKTTQKNKKKVEGLNCSAWDGEVLHEGSFLERLKQSPEIAAEVV
YRCGTCQRTFSNPSNLKRHQRHVHSSVGSFPGDLCEEKVERKTVKRLKLQIPAGGGENHL
CQLCGKGLSSKSALRYHERTHTGEKPYGCTECEAKFSQPSALKTHRRTHTGEKPFVCEEC
GARYTSKHMLIHHKRCHTGERPFMCETCGKSFVSKEYLKHHNRIHTGSKPFKCGVCNRTF
VQRNSLSQHAKVHTGERPYCCDQCGKRFTQLSGLQRHHRIHTGEKPFMCSVCCRTFTDKS
TLRRHTPIHDKSTAWKSSLVTVDGTSKKGQGGGTEHPEEKGEEKNVLLKAEENLPSCSEN
INYQTLTSVEESLTVLPENHSSSNLDSIPEVAILSQEVIIATNLSDFTVLHTQMHSIEPH
LQVIVNAEQINEDV
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaaccatgttgtcttactggaatcggagtcatcccctaaaaacctcttgaat
gagatgcataacctacgtcttgcaggctttttatgtgatgtggtggttcatgttgagcac
catggtgttaaagaagaatttattgcacataaagctatgctagctgcaagcagcatgtac
ttcaaggaggcatttctcagtgagaaagctggggacagtttatcgaccagcgtctacctt
aaggaggtatatgcagtagactttgcttcctatctagagtttatctatactgcaaaggtt
gaggttgaagaggaaaggatacacagaatgctggaggttgcagaaaaactccagtgctca
gacctagcagaaacatgttctcaggtgaaaaaacagatatttgaatcagttttgatagaa
ctgcaaaacttctctgaagcacaagaaactgatgttggtaatgatcttctgtataacaac
tgctctttgtctgagcctcaaaaccttgtagaagagcagactagcctaattacaagttca
gctgaatttgtaaacaataaagacactaataagactgaacttcaaacatcaactgtagtt
atgaaacctaagcagaagtccaaaaagaagaaagaagttgtaaggctcttgtatgcaaag
actagaaagtccagtgggaggttgacaggatgcaaggtttttgttgaaatacctaaaaag
aagtatactcaaaagctacaagaggagcagaaaaaggtggctgaagaggattgtggaggg
aagagttcaataaaaagccaagacattctcgatgttgagatggaagcagagcagacagag
atagcaattaaaccagaattaaaggaagatttgaacaatggtgaaaaagatagcaaggtt
agtgattttgaatttgaagaggactgtgataagaccaaaaagagagagagtaagaagaaa
aaggatactcttaatagtgaagttctaaatgaaaacagcttcccagaggacaaaaagcag
agccatgggaacactgcagaagttatttaccgttgtggcacttgcaaccagacattttcc
aatcgcagcaacctgaaacgccaccagcgccatgtccatagcagcaaagatagttttcct
gatgacctcagtgggaaaaaggttgaaaggaagaagaatgtgaaaagacagttgcttgaa
gttcatgaagggggaggagaatatcatctgtgccagctgtgtgggaaaggcctgagctct
aaaagtgcccttagacgccatgaaagaatgcacactggtgaaaagccttatgggtgtaca
gaatgtgaggctaaattttcacaaccttctgccctcaagacacacataagaacacatact
ggagaaaagccatttgtatgtgatgaatgtggtgccaggtacactcaaaagcacatgctt
ctacatcacaaaagatgccatacaggggaaaggcctttcatgtgtgaaacctgcggtaag
agttttgtttcgaaggaatacctgaaacaccataacagaattcacaccggatctaaacca
tttaaatgtggagtctgcagtagaacatttgtacagaggaattctctttctcagcatgtc
aaagtacacacaggggagcgcccttactgctgcgatcagtgtggaaaacggttcacccag
ctcagcgccctacagcgccatcatcgcatacataccggagaaaaaccttttatgtgcaat
gcttgcggccgtaccttcacagacaaatccacactcagacggcacactccaatacatgat
aaatcaacaccatggaagtcattccttgtaattgtagatggagcatccaagaaaagccaa
gagggagggtctgagcaccaggaggaaaatggagagaacaaagtggatgtattctctaag
gcacaagaaaacctgccatctggttcaaaaaccagcaactaccagactttaacgagcgtt
gaggaaagcttgactgtgttgcctgaaaatcattcctctagtaatttagataccaaaaca
gagggtgcagtattatctcaagaagtcctcatagctatgactttaagtgatcttacagtc
cttcatacacagacacactcagtccaacctcatctgcaagttattgtaaatgcagaacag
cgatcattacgcaagactgtgatggaaaaccatgttgttttattggaatcaaagtcgtcc
cctaaaaacctcttgaatgagatgcataatctacgtcttgcaggtcttttctgtgatgtg
gtggttcatgttgagcaccatggtgttaaagaagaatttattgcacataaagctatgcta
gctgcaagcagcatgtatttcaaggaggcatttctcagtgaaaaaactggggacagttta
tcgaccagcgtctaccttaaggaggtatatgcagcagactttgcttcctatctagagttt
acctatactgcaaaggttgaggttaaagaggaaaggatacacagaatgctggaggttgca
gaaaaactccagtgctcagatctagcagaaacatgttctcaggtgaaaaaacagatattt
gaatcagtgttgatagaactgcaaaacttctctgaagcacaagaaactgatattggtaat
ggtcttctgcataacaactgctctgtgtctgagcctgaacaccctgtagaagagcagaat
agcttaaacacaagttcagctgaatttgtaaaagatcaggacgctagcgacaccaacaag
actgtacttaaaacatcgattttaagtaaaaaatttaagcagaagtcagaaaggaggaaa
gagttgctaaaacctttgtatacaaagaccagaagagccagtgggaggttggcgggacgc
agggtttacattcaaatactaaaaaagaggtatactcgaaagctacaagagcagcagaaa
aaggctgaagaggaaattgtacggaagagtacaagaaaaggccaagatgttcttgatgtt
gagatggaagcagggcagacagtggtgtcactgaaaccagaagaaaaagaagacttgcac
aacgaagatatagataatgattgtgatttaggattggaagaggatcttaagaagaccaca
cagaaaaacaagaaaaaggtagaaggtttgaactgtagtgcttgggatggagaagtcttg
catgaaggcagtttcttggagcgcctaaagcagagccctgaaattgctgcagaagttgtt
taccgttgtggcacttgccagcgaactttttccaatcccagcaacctgaaacgccatcag
cgtcatgtccatagcagtgtgggcagctttcctggcgacctctgtgaggagaaggttgaa
aggaagactgtaaaaagactcaagcttcaaattcctgctggtggaggagaaaaccatctg
tgccagctgtgtgggaagggcctgagctctaaaagtgcccttcggtaccatgaaagaaca
cacactggcgaaaagccttacgggtgtacagaatgtgaagctaaattttcacagccttct
gcactgaagacacacagaagaactcatactggagaaaaaccatttgtatgtgaggaatgt
ggtgctagatacacaagcaaacacatgcttatacatcacaaaagatgtcacacaggggaa
aggcctttcatgtgtgaaacctgcggtaagagttttgtttcaaaggaatacctgaaacac
cataacagaattcacactggatctaaaccatttaaatgtggggtctgcaacagaacattt
gtacagaggaattctctttctcagcatgccaaagtacatacaggggagcgtccttactgc
tgcgatcagtgtggaaaacggttcacccagctcagtggtctgcagcgccatcatcgcata
cataccggagaaaaacctttcatgtgcagtgtttgctgccgtaccttcacagacaaatcc
acactcagacgacacactccaatacatgataaatctacagcatggaagtcatcccttgta
actgtagatggaacatccaagaaaggccaagggggagggactgagcacccagaagaaaag
ggagaggagaagaatgtgcttcttaaggcagaagaaaacttgccatcttgttcagaaaac
atcaactaccagactttaactagtgttgaggaaagcttgactgtgttgcctgaaaaccat
tcctctagtaatttagatagtataccagaggttgctattttatctcaagaggtcatcata
gctacaaatttaagtgattttacagttcttcatacacagatgcattcaattgaacctcac
ctgcaagttattgtaaatgcagaacagataaatgaagatgtttaa
DBGET
integrated database retrieval system
