KEGG   Latimeria chalumnae (coelacanth): 102347551
Entry
102347551         CDS       T02913                                 
Symbol
CDC5L
Name
(RefSeq) cell division cycle 5 like
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102347551 (CDC5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcm03041]
    102347551 (CDC5L)
   03400 DNA repair and recombination proteins [BR:lcm03400]
    102347551 (CDC5L)
Spliceosome [BR:lcm03041]
 Complex B
  Other components
   Prp19 complex
    102347551 (CDC5L)
 Complex C
   Prp19-CDC5 complex
    102347551 (CDC5L)
DNA repair and recombination proteins [BR:lcm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    102347551 (CDC5L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect eIF4G1-like_eIF4E-bd Rap1_C
Other DBs
NCBI-GeneID: 102347551
NCBI-ProteinID: XP_006000982
Ensembl: ENSLACG00000008060
UniProt: H3AHL0
LinkDB
Position
Un
AA seq 803 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEDNADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPALGFYDTAEENYQPLEPDFK
RLRQQHLDGDLRVEKEERERRKDKQNIKRKKDSDLPSAILQTSGVSEFTKKRSKLVLPAP
QISDAELEEVVKIGQASEVARQTAEESGITNSASSALLSEYNVTNSSIALRTPKTPAAQD
RILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLATPFRTPSHGS
DSMTPRGGMTPKPSVGGTPGRTPLRDKLNINAEEGMVDYNEPSFSKQLDRETREQLRMGL
LKLPAPKNDFEIVLPENAEKELEEPEVDESFVEDAADMEARKQAIRDAERERELKRRHMA
VQRDLPRPSEVNETILRPLNVEPPLTELQRSEELIKKEMITMFHFDGLYHQYSEQSGGKK
GKGPGSGSNNAEHIAYLEHNTYEKYSEADLKKARELLAQEMEVVKHGMGHGELSTEAYSQ
VWEECYSQVLYLPGQNRYTRANLASKKDRIESFEKKLEINRGHMTTEAKRAAKMEKKLKI
LLGGYQSRAMGLIKQLNDLWDQVEQASLELGTFEELKRHEDIAIPRRQESLREDVQRQQE
REKELQQRFADLVLEKETLQSKY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgccgcggattatgatcaaaggaggtgtttggagaaacaccgaggatgaaatccttaaa
gcagctgtaatgaaatatggcaaaaaccaatggtctcgtattgcttctctcttgcacaga
aaatcagccaaacagtgcaaagctagatggtacgagtggctggatccaagtattaaaaag
acagaatggtcccgtgaagaagaagagaaattgctccacctggccaagctgatgccaacc
cagtggagaaccattgcacccattattggaaggacagccgcccagtgtttagaacattat
gagtacctgctagacaaagcagctcaaagggacaacgaagaagacaatgcagatgaccct
cggaaactgaaacctggagaaattgacccaaatccagaaaccaaaccagccaggcctgat
cctgttgatatggatgaagatgagctggagatgctttctgaagctagagctcgtctggca
aatacccagggcaagaaggcgaagaggaaagcacgagaaaagcagttagaagaagcaagg
cgccttgcagcactgcagaagagacgtgagctacgagcagctggtatcgagatacaaaag
aagaggaaaaagaaaagaggagtggattacaacgcagaaatcccatttgaaaagaaacca
gctcttggattctacgacacagcagaggagaactatcagccgctagaaccagattttaaa
aggctacgccagcaacacctagatggagacttgcgagttgaaaaagaagaaagggagcgg
agaaaagacaaacagaatattaaaagaaagaaagattctgatttgccatctgctatcctt
cagaccagtggggtgtcagagtttaccaaaaaaaggagcaaattggtgctccctgcaccg
cagatttcagatgcagagctcgaggaagtagtgaaaattggccaggctagcgaagttgca
cgacagacagcagaggaatcgggaattacaaactctgcctccagtgccctcctgtctgaa
tacaatgtcaccaacagcagcattgcccttcgaactccaaaaaccccagcagcccaggac
cgcatcctacaggaagcacagaatctgatggcactgaccaatgtagatacccctctaaag
ggtggcctgaacacccctcttcatgaaagcgatttctcaggagtgactccccagaggcag
gttgtacaaactccaaacacggtgctcgctactcccttcagaactccttctcatggaagc
gacagcatgactccgcgaggtggaatgacgcctaaaccaagcgtaggagggaccccagga
agaactccattacgagacaagttgaacatcaatgcagaagagggaatggtggattacaat
gagccttctttctcaaaacagctagatcgagaaacgcgagagcaactgcgaatggggctg
ctgaaacttcctgctcccaagaatgattttgaaattgtcctgccagaaaatgccgagaaa
gagctggaggagcctgaggtggatgaaagctttgtggaggatgctgcagacatggaggct
cgcaaacaggctattagagatgcagaacgggaaagggaattgaaacggagacacatggct
gtacagcgagatctaccaaggccttcagaagtaaatgaaactatcctcagaccactgaac
gtggagcctcccctgactgagcttcagaggagtgaagagttgatcaagaaagaaatgatc
acaatgtttcactttgatggtctttatcaccaatactccgagcagtctgggggtaagaaa
ggcaaggggcctgggtccggatctaacaatgcagagcacattgcctacttggagcacaac
acttacgaaaaatactcagaagcggacctcaagaaggcccgggagcttctggcacaggaa
atggaggttgtaaaacatggaatggggcacggagagctgtcaactgaagcctacagccaa
gtgtgggaggaatgttatagccaggtgttatacctccctggacagaaccgatacacgcga
gccaaccttgcaagcaagaaagacagaattgagtcatttgaaaaaaagctagagattaat
agaggtcacatgacaacagaagccaagcgagcagcaaagatggagaagaagctaaagatc
ttgttgggcggttaccagtcaagggcgatggggttgatcaaacagctgaacgacttgtgg
gatcaggtggagcaggccagcctggaactgggcacctttgaagagctgaaacgacatgag
gatattgcaattcccaggagacaggagtctttgagagaagatgttcagcgacagcaggag
agagaaaaggaacttcagcagagatttgcagacctggtcctggagaaagagactctacag
tctaaatactga

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