Latimeria chalumnae (coelacanth): 102347559
Help
Entry
102347559 CDS
T02913
Symbol
TAF4B
Name
(RefSeq) TATA-box binding protein associated factor 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102347559 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102347559 (TAF4B)
03036 Chromosome and associated proteins [BR:
lcm03036
]
102347559 (TAF4B)
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102347559 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
102347559 (TAF4B)
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102347559 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
102347559
NCBI-ProteinID:
XP_014349716
LinkDB
All DBs
Position
Un
AA seq
658 aa
AA seq
DB search
MAAPQQPVVTRAPQTTSIQLPASFQIPPEMVLVTSDGGQLMLVSQQALARVQAQVQASGA
PRSTAPTTTQTIRISMAQTPGAQIVTKPVTATSGKAPSQPVCTATVPRPAVVKSLTTIAP
VTVQSAPTVRLVTPATPASVVSQKKIVPTTTKTAATAVEGARILTTTTTTTATSTAKPSS
SLETLENVKKCKNFFATLIKLASGGTQSPEMAKNVTDLVKNLLDSKIEAEEFTNKLYTEL
KSSPQPYLVPFLKRSLPALRQLMPNAQTFIQQCIQQQPRSQPAGAPSASGPGLGTPQQLV
KVTSGPLAAISKPPTQTTVITQPAKVGQNAKPVPLVIQHPPAAAVKQVVTAVPQTSALTV
SRPVTSTAVAVTARVQPTAVPAIVLQASPVQKTPIKENGVPSFREEDDINDVASMAGVNL
SEENARILATNSELVGSVIRSCKDEPFLFTGPLQKKILEIGKKHNITELSSDAVNFISHA
AQERLRGLLEKLTVIAQHRAVSYKDDGRYVLADDTRSQLKFLEQLDRIEKQKKEEEEREV
LLKAAKSRTNKEDPEQMRLKQKAKEMQQLELAQIQQRDANLTALAAIGPRKKRPLDSLLL
GNGAEGSSGSVIPHGISVSGRQLPRQRITRISLRDLIFCMEQERDMKHSLALYRTFLK
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccctcagcagcctgtggtcacaagggccccgcagacgacttctatccagtta
cctgctagctttcaaattcctccagagatggtgcttgtcacaagtgatggtggacagctg
atgttagtttctcagcaggccttggctcgagttcaggcacaagttcaggccagtggagcc
cctagatctacagcacctactacgacacagactataaggatatccatggcacagactcca
ggagcccagatagtaacaaaaccagtgactgcaaccagtggcaaggctccatcacagccg
gtgtgtacagccacagtaccaaggccagctgtagtaaagtctctcaccacaattgcccca
gttactgttcagtctgctccaaccgtgagacttgtaacgccagcaactcctgcatcagtt
gtgtctcaaaagaagattgtcccaacaacaacaaaaacagcagcaacagcggtagaaggg
gcaagaattttgacaactacaactaccacaactgccacttcaactgcaaagcctagcagt
tcactggaaacattagaaaatgtgaagaagtgtaagaatttttttgcaaccttgataaaa
ctggcatctggtggaacccagtctccagaaatggcaaagaatgtgactgacttggtgaaa
aacttactggattcaaagattgaagccgaggaatttaccaacaaattgtacacagagctc
aagtcctcaccacagccgtaccttgtgccttttcttaagagaagtttacctgccttaagg
cagctgatgccaaatgctcagacattcattcagcagtgtatacagcagcaacctcggtca
cagcctgctggagctccctcagcttctggaccaggattgggaaccccacagcagcttgtc
aaagtaacgagtgggccacttgctgcaatcagtaaacccccaacacaaaccacagtcata
acgcagccagcaaaagtgggacaaaatgctaagccagttccattggtaatccagcatcca
ccagctgctgctgttaaacaagtggttaccgctgtaccacagacctctgctctgactgtt
tcaagacctgtaactagtacagctgtggctgtaactgctcgggttcagcctacagcagtt
cctgccattgtattacaagcttctcctgttcagaaaactcccataaaggaaaatggggta
ccttctttcagggaagaggatgatatcaatgatgtggcctctatggctggggtcaacctt
agtgaagaaaatgcacgcatcttagcaaccaactctgaactggttggctcagtaattagg
tcttgtaaggatgaaccattccttttcacggggccccttcaaaagaaaatattggaaata
ggtaaaaagcataacattactgaattgagctcagatgcagtgaacttcatttctcatgct
gcacaggaacggttacgagggcttctagaaaaattaactgtaattgcacaacaccgggca
gtgtcatataaggacgatggcaggtacgttctagcagatgacactagatcacagctaaag
tttttggaacagctggatcgcatagagaagcaaaagaaggaagaggaggaaagggaagta
ctactgaaggcagcaaagagtcgtaccaataaagaagacccagaacaaatgcgattaaaa
cagaaagccaaagagatgcagcagttggaactggcacagatacagcagagagatgcaaat
ttaaccgcactggcagctatcggacctagaaagaagagaccattggactcgctgcttctt
ggaaatggggccgagggatcaagtggcagtgtaattcctcacggcatctctgtatcagga
aggcaactcccacggcagaggataacacgcatcagtctcagggatctcatcttctgcatg
gaacaagagcgagatatgaaacattcgttggccttgtatcgtacctttctcaagtga
DBGET
integrated database retrieval system
