KEGG   Latimeria chalumnae (coelacanth): 102347593
Entry
102347593         CDS       T02913                                 
Symbol
SNF8
Name
(RefSeq) SNF8, ESCRT-II complex subunit
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
lcm  Latimeria chalumnae (coelacanth)
Pathway
lcm04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102347593 (SNF8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcm04131]
    102347593 (SNF8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcm04147]
    102347593 (SNF8)
Membrane trafficking [BR:lcm04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    102347593 (SNF8)
Exosome [BR:lcm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102347593 (SNF8)
SSDB
Motif
Pfam: EAP30 TrmB MarR_2 DotZ MarR
Other DBs
NCBI-GeneID: 102347593
NCBI-ProteinID: XP_005990121
Ensembl: ENSLACG00000016411
UniProt: H3B9R6
LinkDB
Position
Un
AA seq 258 aa
MHRRGVGAGAIAKKKLAESRYKERGTVLAEDQLAQMSKQLEMFKSHLEEFASKHKQEIRK
NSQFRVQFQDMCATIGVDPLASGKGFWAEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQRVLKGRGKFAQDVSQDDLIRAIKKLKALGSGFSMIPVGGTYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIKMSLKWETERANHVLEHLLKEGLAWIDRQSPKEPQYWLPALF
TDLYSQDITPEEAGQALA
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcacagaagaggtgttggagctggggctatagccaaaaagaaactggcagagtcccgg
tataaggagcgaggcacagtgctggcggaggatcagctggctcagatgtcaaaacagctg
gagatgtttaaaagtcacctggaggagtttgccagtaaacataagcaggagatccgcaag
aattcgcagttccgagtccagtttcaggacatgtgtgccaccatcggagtcgatcccttg
gcgtctgggaaaggtttctgggcagagatgctgggggttggcgatttttactatgaattg
ggagttcagataatcgaggtgtgtctcgcgctgaaacataggaacggaggactcatcact
ctggaggaactccaccagagagtgctaaagggaagaggcaagtttgctcaggacgtcagc
caggatgatctcatcagagcgattaagaaactaaaggctctgggaagtggtttcagtatg
ataccagtgggagggacgtacctggtccagtcagtaccagcagaacttaatatggatcac
acggtggtgttgcagcttgctgagaaaaagggatacgtcaccgtgagtgaaatcaagatg
agtctgaagtgggagacggagcgagccaatcacgtgctggaacacctgttgaaggaaggt
ctggcctggattgaccgccagtccccaaaggagccccagtattggctgcctgccctcttc
actgacctttactctcaggacatcactccggaggaggctggccaagctttagcctga

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