Latimeria chalumnae (coelacanth): 102347762
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Entry
102347762 CDS
T02913
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102347762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcm03021
]
102347762
03036 Chromosome and associated proteins [BR:
lcm03036
]
102347762
Transcription machinery [BR:
lcm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102347762
Chromosome and associated proteins [BR:
lcm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102347762
PBAF complex
102347762
GBAF(ncBAF) complex
102347762
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
eIF3h_C
Motif
Other DBs
NCBI-GeneID:
102347762
NCBI-ProteinID:
XP_006010053
Ensembl:
ENSLACG00000006915
LinkDB
All DBs
Position
Un
AA seq
699 aa
AA seq
DB search
MDDEAPAAGVKEEDDQSKGDHSRVIDSGEDNVTEQTHHIIIPSYGAWFDYNCIHVIERRA
LPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAIMRVHAFLE
QWGLINYQVDADSRPLPMGPPPTPHFNVLADTPSGLVPLNPRAPQAPASQQMLNFPDKSK
EKPVELQNFGLRTDVYSKKTLAKSKSANAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENTDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVKEEVPVELVEAHVKKVQEVAKATGKVDPGYGLESSGIAGTSPEEP
EKHDVIEEEKMETEAGGQQMEKQGDGKPTEEVEKVQEGVKEKAAEKEQEGETTEENKTDE
KEKEEENKENVDTNNENEGETGKRMEPDVAEGNVATAAAAALASAATKAKHLAAVEERKI
KSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQAFHMEQLKYAEM
RARQQMEQQQQQQQQQQHTQNAQSGLNPNIASSGGMPPFGAPGHPGMLGHQQPPPYPMMH
HPMPHPHPSQPGQMPGPGPIMPGRMMPNVSSMHPGSGPPHQTPPSMPPMQGNIMGPRPPV
APNGIFPPPPPPSVGAATAAAQPDGIAPPPAAPPASAAP
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaggccccggctgcaggagtaaaggaggaggacgaccaaagcaagggagac
cacagccgtgtgattgattcaggggaagacaacgtcactgagcagacgcatcacattata
attcctagctatggagcttggtttgactataattgtatccatgtgatcgaacgtcgagcc
ttaccagaattcttcaatgggaaaaacaaatccaaatccccagaaatatatctagcttat
cgaaacttcatgattgatacttatcgcctcaaccctcaagaatatttgaccagcactgca
tgcaggaggaacctcactggagacgtttgtgctataatgagagtccatgcatttctggaa
cagtggggtcttattaattaccaggtcgatgcagacagtcggcccttgcccatgggaccc
ccgcccacccctcattttaatgtgttagctgataccccctctggacttgtgcctctcaat
cctcgtgcgcctcaggcccctgcctcccagcagatgctaaacttccctgataagtccaag
gagaaaccagttgagttgcagaactttggcctccgcacagatgtttactccaaaaaaact
ttagccaagagtaaaagtgccaatgccggaagagaatggactgaacaggaaacgctgctt
ttacttgaggctttggaaatgtacaaagatgactggaataaagtctctgagcatgttggc
agtcgcacccaggacgagtgcattctgcacttcctacggctacccattgaggacccttac
ctggagaatacggatgcctctcttgggccgctggcttatcagcctgtccctttcagccag
tctgggaatcctgtcatgagcacggttgctttcctggcatctgttgtggaccccagggtg
gcctcagctgcagccaaggctgccttagaggagttttctcgtgtgaaagaggaggtcccg
gtggagttggttgaagcccatgtaaagaaagtacaggaggtagcaaaggcaacggggaaa
gtagaccctggctatgggcttgagagtagtggcattgctgggactagcccggaggaacct
gagaaacatgacgttatagaagaggagaaaatggaaactgaagccggagggcagcaaatg
gaaaagcagggggatggtaaaccaactgaggaagtggaaaaggtacaggaaggagtgaaa
gagaaagctgcggagaaagaacaagaaggagaaaccactgaagagaataaaacagatgag
aaagagaaagaagaagaaaacaaggagaacgtggatacaaataatgagaatgagggtgag
actggaaaaagaatggaaccagatgttgctgaagggaacgtggcaactgctgctgctgct
gctcttgcctccgctgccaccaaggccaagcacctggcagcagtggaagagcgcaaaatc
aaatcccttgtggctctgctagtggagactcagatgaaaaaactggagataaagctgcgc
cattttgaggaactggaaaccatcatggaccgcgagaaagaagcacttgagcagcagcgg
cagcagctactaacagagcgccaagcatttcacatggagcagctgaagtatgctgagatg
agggcccgtcagcaaatggagcagcagcagcagcagcagcaacaacaacaacacactcag
aatgctcagtcaggcctcaacccaaacattgcaagctctggcggaatgccaccctttgga
gcacctggccatccaggcatgttgggtcatcagcaaccaccaccttatcccatgatgcac
catccaatgcctcatccacacccctctcagccaggtcagatgccaggccctggtcctatt
atgcccggccggatgatgccaaatgtgtccagcatgcacccagggagtggtcctcctcac
cagacaccccctagtatgccaccaatgcaggggaacataatgggtccacgtccacctgtc
gcacctaatggtatatttcctcctcctcctcctccttctgttggtgcagcaactgcagca
gcacagcctgatgggatagccccaccccctgcagccccaccagcttcagctgcaccgtga
DBGET
integrated database retrieval system
