Latimeria chalumnae (coelacanth): 102347812
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Entry
102347812 CDS
T02913
Name
(RefSeq) chromosome unknown open reading frame, human C16orf62
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
lcm
Latimeria chalumnae (coelacanth)
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102347812
Membrane trafficking [BR:
lcm04131
]
Protein recycling
Others
Retriever complex
102347812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5667
Motif
Other DBs
NCBI-GeneID:
102347812
NCBI-ProteinID:
XP_005999702
Ensembl:
ENSLACG00000012530
LinkDB
All DBs
Position
Un
AA seq
965 aa
AA seq
DB search
MRNTAGKHSRVRDYKVERESYALETVPVEFGDYHPLKLITVTDSKTKKIGRKGSTSSTSS
SSSSSVLDPLSSVLDGTDPLSMFAATADPLMAAATMESGKKKREKEEEAAVGSDFEPWSG
KRSEILARYTTTEKLSINLFMGSEKGKATSPGSAVSEKVRNRLEELDDLEEGSQKELLNL
TQQDYMNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGKLVYERIWSMCTDNYHSSLPENFMPENVSDTAKETCLNWFFKIASIRELIPRLYVET
ALLKCNKFISKTGVSESIPRLTATIRGIGDPLVSVYARAYLCRVGMEVAPHLKESLNKNF
FDFLLTFKQIHGDTVQNQLVVQRVEMPVYLTLYSPAIDWILQCIAYRAPEALLTEMMERC
KKLGNNALLLNSVMCAFRAEFIAARSMDLITMIKECDEAGFPKHLLFRSLGLNLALADPP
ENDRLQILNEAWKVITKLKNPQDYISCAEVWVEYTCRHFTRREVNTVLADVIKHMTPDRA
FEDAYPQLQSVIAKILAHFHDFAVLFSMVKFLPFLDMFQKESVRVEVCKSTMEVFIKHQQ
ELTRDPVILNALLHICKTMHDSVNALTLEDEKRTLSILINGFIRMVSFGRDFEQQLSFYV
EARSIFCNLEPVLVHLIHSVNQLAMETRKVMKGNHSRKTAAFVRACAAYCFITIPSLTSI
FTRLNLYLHSGQVALANQCLSQADAFFRAAVSLVPEVPKGITVDGKTRPSEGFLFEFLSN
FFSTLLVVPDHPEQGVLYLVRGLLNVIQDYTWEDNSDTKVRIYANVLHLLAAISQESYLY
HVGKVDSNDNLYGGDPKFLAEINKLCETLILQILDHLKTLGRDETLKRQSALALFLFNSI
LAHGDLRNNKLNQLAVNLWNLAQKHGFADTKTMVRTLEYIKLQSKDPELRHFSELASRLP
LQSRT
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacacggctggaaagcattcaagagtccgtgattataaggtggaaagagagtcg
tatgctctggagaccgtgcctgtggagtttggagattaccatcctctgaaactgatcaca
gttacagactcgaagacaaagaagattggtcggaagggaagcacctcctccacgtcgtcg
tcctcctccagctcggttctagacccgctgagcagtgtgctggatggcacagatccactc
tccatgtttgctgcaacagcagatcccctgatggctgcagctaccatggagagcggaaag
aagaagagagagaaggaggaggaggcagctgtgggaagcgactttgagccatggtctggg
aaacgcagcgagattcttgcaagatacacaaccacagaaaaactatctataaatctcttc
atgggatcagaaaaaggcaaagctacaagccctggctctgccgtttcggagaaggttcgg
aatcgacttgaggagctggatgaccttgaggaggggtctcagaaggagctgctgaatttg
actcagcaggattacatgaaccggatcgaggagcttaaccagtcactgaaggatgcctgg
gcctcggaccagaaagtaaaggcgctgaaaatcgtcatccagtgttcaaagctgctttca
gatacaagcgtcatccagttctatcccagcaagtttgtcctcatcaccgacatcctggac
acatttggcaagctggtatatgagcgaatttggtccatgtgtacagataattatcactcc
tctttacctgaaaattttatgccagaaaatgtcagtgacaccgccaaagagacctgcttg
aactggtttttcaagattgcttcgatccgagaactcattcctagactctatgtggaaaca
gcattactgaaatgtaacaagtttatatcaaaaacgggggtctctgaaagtatcccccgt
ctaacagctaccatcagagggatcggggacccattggtgtcagtgtatgccagagcgtac
ctttgcagggttgggatggaagtagcgccacacttgaaggagagcctgaacaaaaacttt
tttgatttcctgctgacctttaaacagatccatggagacacggtccagaatcagctggtg
gtgcagcgagtggagatgccggtgtacctgaccctctattcccctgctatagactggatc
ttgcagtgcattgcttaccgagctcctgaggcccttctcactgagatgatggaaaggtgc
aagaaactcggaaacaatgctttgctgttaaactcggtgatgtgtgcattcagggcagag
tttatcgctgcgaggtcgatggatttgatcactatgattaaggaatgcgatgaagctgga
ttccccaagcatctccttttccgatctctgggcttgaacctagccttggctgaccctccc
gaaaatgaccggctgcagatcctgaatgaagcctggaaagtcatcactaaactgaagaat
ccgcaggactatatcagttgtgcggaggtttgggtggaatacacctgcaggcattttaca
aggagagaagtgaatacagtgctggctgatgtcatcaaacacatgacccccgatcgtgct
ttcgaagatgcttatccacagcttcagtccgtaattgcaaaaattttagcccatttccat
gactttgctgttcttttctcaatggtgaaattcctgccattcctggatatgtttcagaag
gagagtgtccgagtggaagtctgtaaatccacgatggaagtgtttattaaacaccagcag
gagctgaccagggaccctgtcatacttaatgcattgctgcatatttgcaagaccatgcat
gactctgtcaatgccttaaccctggaagatgaaaagagaactctctcgattttaataaat
ggctttatcagaatggtttcttttggccgggattttgagcagcagctgagtttctatgtg
gaagcccggtcgatcttctgtaacctggagccggttctcgtgcatctgatccatagtgta
aaccagctggctatggaaaccagaaaagtgatgaaaggcaaccattccagaaaaacagca
gcatttgtcagggcttgtgccgcatactgtttcattaccattccgtccctcacgagtatc
ttcacacgtcttaacctctatctgcactctggacaggtggccttggcaaaccagtgcctc
tctcaagctgatgccttcttcagagcagcggtgagcctggtgcccgaggtgccaaagggg
atcactgtggatggcaaaacgcggccttcagaagggtttcttttcgaattcctcagcaat
ttcttttccactctcctggtggttcccgaccacccggagcaaggcgtcctgtacctggtg
cgggggcttctgaacgtgatccaggactacacctgggaggacaacagtgacaccaaagtc
cgaatctacgccaatgtgctgcatctgttagcagccataagtcaggagagctatctctac
cacgtaggcaaagttgactccaatgacaacctgtatggcggagaccccaagttcctggct
gagatcaataagctgtgtgaaacattgattctccagatcctggaccacctcaagaccctc
gggagagatgagactttgaagcggcagagtgccctggccttgttcctcttcaacagcatt
ttagcccacggagacctgcggaacaataaactgaaccagctggcagtcaacttgtggaac
ctggctcagaaacatggcttcgcagacacaaaaaccatggtgagaacattagaatacatc
aaactgcaaagcaaagatccagaacttcgccacttttctgaactggcctcaagacttcca
ctgcagtccaggacctga
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