Latimeria chalumnae (coelacanth): 102347818
Help
Entry
102347818 CDS
T02913
Symbol
VPS36
Name
(RefSeq) vacuolar protein sorting 36 homolog
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102347818 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102347818 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102347818 (VPS36)
Membrane trafficking [BR:
lcm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102347818 (VPS36)
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102347818 (VPS36)
Exosomal proteins of colorectal cancer cells
102347818 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
NAI2_C
Xre-like-HTH
BBL5_2nd
ICR5_C
Scy
BBL5
Motif
Other DBs
NCBI-GeneID:
102347818
NCBI-ProteinID:
XP_014348062
LinkDB
All DBs
Position
Un
AA seq
373 aa
AA seq
DB search
MDRFAWTRGLLEINETLVIQQRGVRLYDGEEKLKWDVGILLLSTHRLIWRDQKNHECCVA
IPLSQIVFFEEQAAGIGKRNRPISLLMILKYLKYKEYFPPLPISFYRRLSEEMTQRRWER
VPVSQPIQTSSRTQAGRVRAVGIVGIERKLEEKRKETDKNISEAFEDLGKLMEKAKEMVE
LSKSIANKIKDKQGDITEDETIRFKSYLLSMGIDNPVTRETHGSGTHYHMQLAKQLAEML
RKHLEEHGGIMALTEVYCLVNRARGMELLSPEDLVNSCKMFEALKLPLRLRIFDSGVMVI
QLQSHNEEEMVASALETVSDKGSLTSEEFAKLIGISVLLAKERLLLAEKMGHLCRDDSVE
GLRFYPNLFITQN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttcgcgtggaccagagggctactggagataaacgagactttggtaatccag
cagcgcggagtgcgcttgtatgacggggaggagaagttgaaatgggatgtagggattctt
cttctcagtacacatcggctgatttggagggaccaaaaaaatcatgaatgctgtgtagct
ataccactttcccaaattgtgttctttgaggagcaggctgctggtataggaaagaggaat
agacctatcagcctcctaatgattttgaaatacctaaaatataaggagtactttcctcct
ttgcccatatctttctacaggcgtttatcagaagaaatgacacagaggaggtgggaacgt
gtgccagtatcccagccaattcagacaagtagcaggacacaggcaggaagagtcagggct
gtaggaattgtgggtattgagaggaaattagaagaaaagagaaaggagacggacaaaaac
atttctgaggcttttgaagatctcggcaaattgatggaaaaggccaaagaaatggttgag
ttatccaaatcaatcgctaacaaaatcaaagataaacagggagacatcactgaggatgag
actatccggttcaagtcttatctgttaagtatgggtattgataatccagttacaagagaa
acccacggctcaggtacacactaccacatgcaacttgcaaaacagctggctgagatgcta
cgaaaacatttagaggagcatggtggaataatggcgcttacagaagtgtattgcctagta
aatcgggctcggggaatggagcttctttcccctgaagatttggtgaattcctgtaaaatg
tttgaagcactgaaactacctctaaggttacgtatctttgacagtggagtgatggttatt
cagcttcagtctcataatgaagaagaaatggttgcttcagctctagaaacagtatcagat
aaaggttctcttacatctgaagaatttgccaagcttataggaatttcagtccttttagcc
aaagaaaggttgcttctggcagaaaagatgggccatctttgtagagacgattctgttgaa
ggcttgcgtttttacccaaacttgttcataacgcaaaactaa
DBGET
integrated database retrieval system
