Latimeria chalumnae (coelacanth): 102347852
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Entry
102347852 CDS
T02913
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1
KO
K13885
scavenger receptor class B, member 1
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm03272
Virion - Hepatitis viruses
lcm04145
Phagosome
lcm04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
102347852 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102347852 (SCARB1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
102347852 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102347852 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcm04147
]
102347852 (SCARB1)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102347852 (SCARB1)
Exosome [BR:
lcm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102347852 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD36
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
102347852
NCBI-ProteinID:
XP_014339651
Ensembl:
ENSLACG00000012958
UniProt:
M3XK04
LinkDB
All DBs
Position
Un
AA seq
521 aa
AA seq
DB search
MPVSQNKIAIALGILGAAITIFGAVLVFVGPDTINQQIVKNVQIDPKNKMTFTMWKDIPV
PFFFSIYIFDVKNPDEILRGEKPVVNQRGPYVYREYRQKDNITFHDNGTVSYQEYRHFHF
WRNMSVGSEDDILTVPNMLVLGASIMMENIPYVMKLAISAGFKMFKEEAFVTRKVGELIW
GYEDPLVDFINSYFPDMIPFKGKFGLFATFNNSNTGLFTVFTGVDDISRVHMVDSWNGLK
TVNYWRSKQCNMINGTSGQMWPPFMTPSTTLRFYSPDACRSMELVYQESGSFQGIPTFRY
VAPKTLFANGTDYPPNEGFCPCRQSGIQNVSACRFNSPVFISHPHFYNGDPTLAQAVDGL
HPNEKDHALFIDVHPVTGIPMNCSIKLQLNLFIKAVRGFIETGKISPVVLPVLWFGEIGY
IDGQVLSTFRTNMVVLPAILEYLQYIFIALGCLFIIIAAILVIRNKDKNPLFCRSYKKCT
VVNEIKLFETEKSTMATANGTVLQEVDFVETCPGGEAPQDV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtcacaaaataaaatcgcaatagccctggggattttaggagcggcaataaca
atttttggggcagttctggtttttgtaggacctgatactataaatcagcagatagtcaag
aatgtacagatagaccccaaaaacaagatgaccttcaccatgtggaaagacattcctgtt
ccttttttcttctccatctatatctttgacgtaaagaatccagacgagattcttcgagga
gagaagccagttgttaaccagcgtggcccttatgtgtacagagagtatagacagaaggac
aatataacttttcatgacaacggcacagtttcctatcaagagtatcgccatttccatttt
tggcgcaacatgtcagttgggagcgaagacgatatcctcactgttccaaatatgctggtt
ttgggtgcttctataatgatggaaaatataccctatgtgatgaagcttgcaataagtgct
ggtttcaaaatgttcaaagaggaggctttcgtaacacggaaagttggagagctaatctgg
ggctatgaagatccacttgttgatttcataaacagttactttccagacatgattcctttt
aaaggaaaatttggattatttgcaactttcaacaactccaatactggattgttcaccgtt
ttcactggagttgatgacattagccgggtccatatggtggattcatggaatggactgaaa
acggttaattactggcgttcgaagcagtgcaacatgatcaatggcacatctggacagatg
tggcccccctttatgactccttcaaccactcttcgcttctatagccctgatgcttgcaga
tccatggaactagtataccaggaatctggatcgtttcaaggtatacctacattccgatat
gtggctccaaagactttgtttgctaatggaactgattatccaccaaatgaaggcttctgt
ccctgcaggcagtcagggatccagaatgtcagcgcatgcagatttaattctccagttttt
atatcccacccccacttttataacggagacccaactctagcacaggctgtggatgggctt
cacccaaatgaaaaggatcatgcgctcttcatcgatgttcatccagttactggcattcca
atgaactgctccatcaagctgcaactaaatttattcataaaagcagttcggggctttata
gagactgggaaaatcagtcctgttgtgcttccagttctttggtttggagagattggatat
attgatggtcaagttttaagtacattccgtaccaatatggtggtgctaccagcaatcctg
gaatacctacaatatatttttatagctttgggctgccttttcatcataattgctgctatt
ttggtaatccggaataaggacaaaaaccctttattttgccgtagttataaaaagtgcaca
gtggttaatgagattaaactgttcgaaacagaaaaatccacgatggctactgctaatggg
acggtcctgcaagaggtcgattttgtagaaacctgcccaggaggagaagcaccccaagat
gtttga
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