Latimeria chalumnae (coelacanth): 102347991 Help Entry 102347991         CDS       T02913                                  Symbol SF3B3 Name (RefSeq) splicing factor 3b subunit 3   KO K12830   splicing factor 3B subunit 3 Organism lcm  Latimeria chalumnae (coelacanth) Pathway lcm03040   Spliceosome Brite KEGG Orthology (KO) [BR:lcm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102347991 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:lcm03021]     102347991 (SF3B3)    03041 Spliceosome [BR:lcm03041]     102347991 (SF3B3)    03036 Chromosome and associated proteins [BR:lcm03036]     102347991 (SF3B3) Transcription machinery [BR:lcm03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      102347991 (SF3B3) Spliceosome [BR:lcm03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     102347991 (SF3B3)  Complex B     102347991 (SF3B3)  Complex C    U2 SnRNP specific factors     102347991 (SF3B3) Chromosome and associated proteins [BR:lcm03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      102347991 (SF3B3)     TFTC complex      102347991 (SF3B3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Nucleoporin_N Motif Other DBs NCBI-GeneID:  102347991 NCBI-ProteinID:  XP_014347916 Ensembl:  ENSLACG00000012501 LinkDB All DBs Position Un AA seq 1217 aa AA seqDB search MFLYNLTLQRATGITHAIHGNFSGTKQQEIIVSRGKILELLRPDPNTGKVHTLLTVEAFG IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNFFEKVHQETFGKSGCRRIVPGQF LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMSVLKTGFLFVASEFGNHYLYQ IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMSCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEYDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGEKGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPETNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPEAIFGAPKAGSGQWASVVRVMNPIQGTTLDLMHLEQNEAAFSVAVCKFANSG DDWYVLVGVAKDLILSPRSVAGGFIYTYKLVNNGEKLEFVHKTSVEEVPAAICPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHLPNFIIGIQTIGHRVIVSDVQESFVWVRYKRNENQ LIIFADDTHPRWVTTACLLDYDSMAGADKFGNISVVRLPPNINDEVDEDPTGNKALWDRG LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHLEMHLRSEHPPLCGRDHLSFRSYYFPVKNVLDGDLCEQFNSMDPAKQKAVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttcctgtacaacctgacgttacagagagccacgggcatcacacatgccatccatgga aacttctctggaaccaaacagcaagagattattgtttccagggggaagatcctggagttg ctgcgtcctgatcccaacacggggaaagtgcacacgttactgacggtggaggcctttggc atcgttcgctccctcatggcctttcggctgactgggggcaccaaagactacattgtggtg ggcagtgattccggacgcatcgtcattctggagtaccagccttccaagaacttcttcgag aaggtccaccaggagacctttgggaaaagtggatgtcgaagaatcgtacctggccagttc ttggctgtggaccccaaggggcgagctgtcatgattggtgccatagagaagcagaagctg gtctacatcctgaacagagatgcggcggcccggctgaccatctcctcgccgttggaggcg cacaaggccaacacgctggtgtaccatgtggttggcgtggacgttggctttgagaacccc atgttcgcctgcctcgagatggactacgaggaggcagataatgaccccacaggcgaggca gcagcgaacacccagcagaccctgaccttctacgagttggacctcggactcaaccatgtt gttaggaaatacagtgaacctctggaggagcacggcaactttcttataactgttccagga ggttccgatggccccagtggagtgctgatctgctctgagaattacatcacctataagaac tttggagaccagccggacatcagatgtcccattcccaggagaaggaatgacctggatgac cccgagagagggatgatcttcgtctgctctgccacccacaagaccaagtcgatgttcttt ttcctggcccagacggagcagggtgatattttcaaaattacgctggagacagacgaggac atggtaacggagatccggctgaaatattttgatacggttccagtggccgccgccatgtca gtgctgaaaactggattcctctttgtggcttcagaatttggaaatcactacctgtaccag atcgcccacctgggcgacgacgacgacgagcccgagttctcctccgccatgcccctggag gaaggcgacacttttttcttccagccccggcccctgaagaacctagtactggtggatgaa caagacagcctttcgccgatcatgtcgtgtcagattgctgacttagccaatgaggacacc ccccagttgtatgtggcctgcggaagaggcccccgctcatctctgagagtcttgaggcat gggcttgaggtttctgaaatggccgtctccgagctgcccggtaaccccaacgccgtatgg accgtgaggcgtcatatcgaagatgagtatgatgcctacatcatcgtgtccttcgtcaat gctacactggtcctgtctattggtgagactgtagaagaagtgacagactccgggttcctg ggtaccaccccgaccctgtcttgttctctccttggggacgacgctttagtgcaggtgtac ccagatggcatccgacacatccgtgcagacaagcgagtgaatgagtggaagacccctggc aagaaaaccatcgtgaagtgtgctgtgaaccagagacaggtggtgatcgccctgacagga ggggagctggtttactttgaaatggacccttctgggcagctgaacgaatacacagagagg aaggagatgtccgccgacgtggtgtgcatgagcctggcgaacgtcccgcctggagagcag cgttcccgcttcctggctgtcgggctagtcgacaacactgtcaggatcatctcccttgac ccctcggactgcttgcagccactgagtatgcaggccttacctgcccagccggagtccctg tgtattgtggagatggggggcactgagaagcaggatgagctgggagagaaaggctccatt ggattcctttacttaaacattggcttacagaacggtgtgttgttgagaacagtcttggac ccggtaactggagatttgtctgacaccagaaccagatatctgggttcgcggcctgtgaag ctcttccgggtcaggatgcaaggacaggaagcggtgttggcgatgtccagtcgctcgtgg ctcagttactcctatcagtcacgtttccacctgacgccactctcgtatgaaacgctggaa tacgcctctggcttcgcctcggagcaatgccctgaggggattgttgctatctctactaac acactgaggattttggccctggagaagctgggagctgtcttcaatcaggtggccttccca ttgcagtacaccccaaggaagttcgtcattcatcctgagaccaacaacttgatcatcatt gagacagaccacaacgcctacacagaggccaccaaggctcagaggaagcagcagatggcg gaggaaatggtggaagctgctggtgaggacgagcgggagctggctgcggaaatggctgcc gccttcctgaacgagaacctaccggaggcgatcttcggcgcccccaaggccgggagcggt cagtgggcctccgtcgtcagggtaatgaaccccattcaggggaccaccttggatctcatg cacctggagcagaacgaagcagcgtttagcgtggctgtgtgcaaatttgccaactcggga gacgattggtatgtgcttgtcggagttgccaaggacctgatcctcagcccacgctcggtg gctggaggcttcatctacacctacaagctggtgaataacggagagaaactggagtttgtt cacaagacttcagttgaggaggtgccagcagcaatctgcccgttccagggtcgagtcctg attggggtgggtaagcttttgcgtgtttatgaccttggaaagaagaaactgctgaggaaa tgtgagaacaagcatctcccaaatttcatcatcgggattcagacaatcggccatcgcgtg atcgtgtccgacgtgcaggagagctttgtttgggtccgctacaagaggaatgagaaccag ctgattatcttcgccgacgacacgcatccgcgctgggtcaccaccgcctgccttctcgac tacgattccatggccggtgcagacaagttcggaaacatctctgtggtcaggttaccgcca aacatcaacgatgaggtggacgaggatcctacggggaacaaagcattgtgggacagagga ctgctcaatggagcctcccagaaggcggaggtgattgtaaactaccacgtaggggaaacg gtgctgtcgttacagaagaccactctcatcccagggggctcggagtctctggtgtacacc actttgtctggggggattggcatcctcgtgcccttcacgtcccatgaggatcatgacttt ttccaacatctggagatgcacctgagatctgaacaccccccactgtgtggacgggaccac ctaagcttccgctcttactatttccccgtcaagaacgtgctggatggagacctatgtgag cagttcaactccatggatcctgccaaacagaaggccgttgcagaggagcttgaccgaacg ccgcccgaagtctccaagaagctagaagacatccgaacacgctacgctttctaa

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