Latimeria chalumnae (coelacanth): 102348031
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Entry
102348031 CDS
T02913
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04080
Neuroactive ligand-receptor interaction
lcm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102348031
04082 Neuroactive ligand signaling
102348031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcm04040
]
102348031
Ion channels [BR:
lcm04040
]
Ligand-gated channels
GABA-A
102348031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
102348031
NCBI-ProteinID:
XP_006011158
LinkDB
All DBs
Position
Un
AA seq
822 aa
AA seq
DB search
MAEDTRKATVAPVVFAGFCRVSQFKHAAAFNLTRFEQAPPALLCDPHSNRKVFTSILIFS
FPSVNIADKEYCSHKGQLFVFLNNLNKVATPASPADCDTFVFSVDLQWNKFNDEVIESFD
HEIQQLKEVLCKFEEDIVEEMETLCKATESMFCLSFEKSVRRSPLRSVDLLFLLRIQHST
QVFPPLPPGHQHVPFKTISCASKTMLAGDRLVMMDGRDYLRISTTISSFIIMLKTMHLPV
TCPVQVLSPPPPPKPPSRDQGTIKDNVELPSNPALANFKCLVQVKACFLPITCAEQQKDY
CFLTSLTVSLNWTRGRILQAPRQEQLKICMVEIVKTTYEGKNDNVQFSLLCSYLSWLGQL
ANKSGSYHGQNNDICSSALSICDRAAVVLVPLSVQANSLEDEAKNNITIFTRILNRLLDG
YDNRLRPGLGDRVTEVHTDIYVTSFGPVSDTDMEYTIDVFFRQKWKDERLKFSGPMNILR
LNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLED
FPMDAHACPLKFGSYAYTISELTFIWTYNASDSVVVADDGSRLNQYDLLGQTVGKETVRS
STGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVND
KKKEKASIIKKNNAYAVAVANYAPHIAKDSVLPTISKSATGEPNKTKPEAKPQENKKTFN
SVSKIDRMSRIMFPVLFGTFNLVYWATYLNREPVLEGFEPPE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagataccagaaaagcaactgtagctcctgtagtgtttgcaggtttctgtaga
gtttctcagttcaaacatgctgctgcattcaatctaacacgttttgaacaagctccccca
gctctcttgtgtgatccacatagcaacaggaaggtgtttacttctattctgatattttca
tttccttcagtaaatattgctgataaggaatattgcagccataaaggtcagttatttgtt
tttctaaataatttaaacaaggtggcaactcctgcctctccagctgactgtgacactttt
gtgttcagtgtcgacttgcagtggaacaagtttaatgatgaggtaattgagtcattcgat
catgagattcagcaactgaaagaagtgctttgcaagtttgaggaagacatagtggaggaa
atggaaacattgtgtaaagctactgaaagcatgttttgcctttcatttgaaaaatctgtg
agaaggtctcctctcaggtctgtagacttgttgtttctgttgaggattcagcattctaca
caagtgtttcctcctttgccaccaggccatcaacatgttccttttaaaactatcagctgt
gcgagtaaaacaatgttggcaggggataggttggttatgatggatgggagagattacctt
aggatttctacaaccatttcttctttcatcattatgttaaaaactatgcatctgcccgtc
acatgcccagttcaagtgctaagtcctccacctccaccaaagcccccatccagagatcag
ggaactattaaagataatgtagagttgcccagcaaccctgcattggctaactttaagtgt
ctggttcaggtaaaggcttgctttctacccatcacttgtgcagaacagcagaaagattat
tgctttctcactagccttacggtttctctcaactggactcgtgggcgaattctacaggca
ccacggcaggagcagctcaagatttgcatggttgagatcgtgaagaccacctatgaagga
aagaacgacaatgttcagttttctctcctttgttcttatttgtcatggcttggtcagctg
gcaaacaagagtggctcatatcatgggcaaaacaatgacatttgctcttcagcattaagt
atctgtgacagagctgctgttgtgctggtgcccttatcagtgcaggccaactctttggaa
gatgaagccaaaaataacatcaccatctttacgaggattctcaacagacttctggatggc
tatgataatcgtctcaggccaggattaggagacagggtaactgaagtgcacactgacatc
tatgttacaagctttggacctgtttctgacacagacatggaatacacaatagatgttttc
tttcggcaaaaatggaaggacgagaggttaaaatttagtggtccaatgaacattcttaga
ttaaacaacctaatggccagcaaaatatggactcctgacacattctttcataatgggaag
aaatcagtagctcacaacatgacaatgcccaataaactgttgagaatccaagatgatggt
actctattatatacaatgagattaactgtccaggctgagtgtccaatgcacctggaagac
tttccaatggatgcccatgcttgtcccttaaaatttggcagctatgcatatacaatttca
gaactgacattcatctggacatacaatgcatctgattcagttgtggttgcagatgatggc
tcaagactaaatcagtatgatctgttggggcaaaccgtaggaaaagaaacagttagatca
agtacaggagaatatacagtcatgacagcacatttccacttaaagagaaagattggctat
tttgtgattcaaacgtacttaccatgcattatgacagtcattctttcacaagtgtcattc
tggttgaacagagaatctgttcctgcaaggacagtctttggcgttacaactgtgctgacc
atgacaacacttagtatcagcgctagaaactctcttccaaaagtggcttatgcaacagca
atggattggtttattgctgtttgctatgcttttgtattttctgcattgatagaatttgcc
actgtgaattactttacaaagcgtggatgggcatgggatggaaaaagtgtagtaaatgat
aagaaaaaagaaaaggcatcaattattaagaaaaacaatgcatatgcagtagcagttgct
aattatgcaccccatattgccaaggactccgttctgccaacaatctcaaagagtgctact
ggagaacccaataagacaaagccagaagcaaagccacaagaaaacaagaaaacattcaac
agtgtaagcaaaattgatagaatgtcaaggataatgttcccagttttatttggaaccttt
aacttggtgtactgggctacgtatttaaacagagaacctgtattagaagggtttgagcca
ccagaataa
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