Latimeria chalumnae (coelacanth): 102348156
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Entry
102348156 CDS
T02913
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102348156 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcm04131
]
102348156 (VPS45)
Membrane trafficking [BR:
lcm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102348156 (VPS45)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
NLRC4_HD
Motif
Other DBs
NCBI-GeneID:
102348156
NCBI-ProteinID:
XP_006001639
Ensembl:
ENSLACG00000013219
UniProt:
H3AZF0
LinkDB
All DBs
Position
Un
AA seq
570 aa
AA seq
DB search
MNVVLAVKQYISKMIEDSGPGMKVLLMDKETTSIVSMVYTQSEILLKEVYLFERIDSMNR
DSMKHLKAICFLRPTKENVEYLIQELHKPKYSVYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNILGCSQGRNWDPFHLARTTQGLTAVLLSLKKCPMIRYQLS
SDMSKRLAESVKQLITKEYELFDFRRTEVSPLLLILDRSDDPISPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFGEIGTNIKNLMEDFQKKKPK
GQQKLESITDMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLMEVSEVEQDLACQ
SDHSNAHQNVRRLLQNPKASELDAVRLVMLYALRYERHSSNNLPGLMEDLNRKGVSDKYR
KLVSSVVDYGGKRVRGSELFSPKDAMAITKQFFKGLKGVENVYTQHQPLLHETLDQLVKG
KLKDGQYPYLGPNTLRDRPQDVIVFIIGGATYEEALTVYNLNRVTPGVRIVLGGTTIHNT
KSFLEEVTSAGVHSRSADRPQGAVRSTSRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtgctagcagtgaagcagtacatctctaaaatgatagaggacagtgggcct
ggcatgaaggttctgctcatggataaagagacaaccagcatagtgagcatggtgtacacc
cagtcagagatcctgctgaaggaagtctacctctttgaaagaatcgactccatgaaccgc
gacagcatgaagcacctaaaagccatctgcttcttgcggccgaccaaggagaatgtggag
tacctcattcaggagttgcacaaacccaagtacagtgtttattttatttatttcagtaac
gtgatcagtaagagtgacgtgaagtcgttggctgaggcagacgagcaggaagtggtagca
gaagtccaggagttctatggtgattacattgctgtgaatcctcacgtgttctccctaaac
attcttggatgctcacagggtcggaactgggaccccttccacctggccaggaccacccag
gggctaacggcagtgctcctctccttgaagaaatgccccatgattcgttaccagctctct
tcggacatgtctaagagactggcagagagcgtcaagcaactgatcaccaaagagtacgag
ctgtttgatttccgccgcactgaggtttcgcctctgcttttgatcctcgaccgtagtgat
gatcccatctcaccgctgttaaatcagtggacgtaccaggcaatggtccatgaattactg
gggataaacaacaaccggattgacctttcccgggtgcctggaatcagcaaggacctgcgg
gaagttgtgttgtcggcagagaatgatgaattctatgctaataacatgtacctgaatttc
ggagagattggcaccaacattaagaacctgatggaagattttcagaagaagaaaccaaag
ggccaacagaagctggagtccataacagatatgaaggcctttgtggagaattacccacag
ttcaagaagatgtctggcacagtgtccaagcatgtgacggtggtgggggagttgtcccga
ctggtcagtgagcggaacctcatggaagtgtcggaggtggagcaggacttggcctgtcag
agtgaccactccaatgctcatcagaatgtgaggagactcctccagaaccccaaggcatcg
gagctggatgctgtccgtctggttatgctctacgccttgcgctatgaacgccacagcagc
aacaacctgccaggactgatggaggatctcaacaggaagggggtttctgacaagtacagg
aagttggtgtcgtcagtggttgattatggtgggaagagagtgaggggaagtgagctgttc
agtcccaaagatgccatggcgatcaccaagcagttttttaaaggattaaagggggtggag
aatgtttacacccagcaccagcctctgctccacgagactttggaccagcttgttaaaggg
aagctgaaggatggccagtacccttacctggggccaaatacactacgtgacagaccacaa
gacgtcattgtgtttattattggcggagcgacgtacgaggaggctctgacggtgtacaac
ctgaaccgagtcacccccggcgtgaggatcgtcctgggagggaccaccattcacaacacg
aaaagttttctggaggaggtgacatccgccggggttcatagccgaagcgctgaccggcca
cagggtgcagtccgttccacgtccagacggtga
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