Latimeria chalumnae (coelacanth): 102348174
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Entry
102348174 CDS
T02913
Symbol
CHPF2
Name
(RefSeq) chondroitin polymerizing factor 2
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
lcm
Latimeria chalumnae (coelacanth)
Pathway
lcm00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lcm01100
Metabolic pathways
Module
lcm_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
102348174 (CHPF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcm01003
]
102348174 (CHPF2)
Enzymes [BR:
lcm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
102348174 (CHPF2)
Glycosyltransferases [BR:
lcm01003
]
Glycan extension
O-Glycan
102348174 (CHPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
102348174
NCBI-ProteinID:
XP_006006955
Ensembl:
ENSLACG00000003341
LinkDB
All DBs
Position
Un
AA seq
760 aa
AA seq
DB search
MRLSSFLAVLRPALPLILGLSLGCSLSLLRVSWTQGDENEPCLDVEDNGGLSVGNPHLNQ
GLGSKQITGSKDFQPRIVPYYRDPNKPHKKVLRTRYIHTELGIREHLLVGVLSSRTSLNT
LAVAVNKTVAHHFSRLLYFTGLRSLKVPHGMQVIAHGDDRPVWLMYETIRYVYEHFGNEY
EWFFFVQDDTYTQAERIKAAVSHLSAGQELYMGRAEEFIGGDEKSKYCHGGYGYLISRGL
LVRLQQYLDTCRNDILSVRPDEWLGRCIIDYLGISCVDSHQGVEYRFFELEKNADPEREE
SSKFKNAFTVHPVTDLTLMYQLHKRYSEIELERTYQEIQKLQLQIKNLSSLTPEGAAGAT
WPLGINPPFKPKSRFEVINWDYFTEDHIFSCVDGSPKCELQGVDKVDVVDIIETAVQELN
EKYQPFLRFMKRQMLNGYRRFDPTRGMEYILDLVLDAFTQKGHSQTILRRVSLLRPLSNI
EIIPMPYVTEATQVHIILPVTIREQDYVGNFLDMYVMNALDTHDNVLLTFLFIYDPFDAQ
RVSQNDVFAGIKSMIAEVEKRYSDIKIPWISVKTEVPSQVKLMDIISKKHPVDTLFFISS
VWTEVNTEFLNRCRMNAISNWQVFFPIHFQEFNPSLAYRDQQSSSSEFLRDGHFDRYVFE
EACFYNADYMTARTKMAADILDNDEILESMEVYDVFIKYSNLHIFRAVEPALVQKYVHHA
CNPRLSEEVYHRCILSNLEGLASRSHLGMALFEQEQANST
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtcctcctttctggctgtcttacgccctgctttgcccctgattttgggcctc
tccctggggtgtagcctcagtttgctgcgagtgtcctggactcagggagatgagaatgaa
ccgtgcctggatgtggaggacaatggtggtctgtcagttgggaatccacacctcaaccaa
gggcttggatcaaaacaaataacgggcagcaaggacttccagcccaggattgttccttac
tacagagatcccaataaaccacataagaaagtgctcaggacaagatatatccatacagag
ctggggatccgagagcatttgctggttggggtcctgtcctccagaacctcccttaacacc
ttggctgtggccgttaacaagactgttgcccatcacttcagccggctgctttacttcacg
ggcctgcgtagcctcaaggtaccccatggtatgcaggtgatcgcccatggcgacgaccgc
cctgtctggctgatgtatgagacaatccgctatgtctacgagcactttggcaacgagtat
gaatggttcttctttgtccaagatgatacctacacccaggcagaacgcatcaaggcagct
gtgagccacctgagtgcaggccaagaactttatatggggagggcagaggagttcattggt
ggggatgagaagtccaagtactgccatgggggctatggctacctgatatctcgcggcctg
ctggtcaggctccagcagtacctagacacctgcaggaacgacatcctcagtgtccgaccg
gatgagtggcttggccgttgcatcatcgactatctagggatcagctgtgttgatagtcac
cagggtgtggagtatcgtttctttgaactggagaagaatgcagacccggagagagaggag
agctccaagtttaaaaatgctttcactgtccatccagtgactgacctgacgctcatgtac
cagctgcacaagcgctacagtgagatcgagctggagcggacttaccaagaaatccaaaag
ttgcagctgcaaattaagaacctcagcagcttgaccccagagggcgcagcgggagccacg
tggcccttaggcatcaaccctccttttaagcccaagtcccgctttgaagtgataaactgg
gactatttcacagaagaccacattttttcttgtgtggatggctctccaaaatgtgagctg
caaggagtggacaaggtggacgtggtagacatcattgagacagcagtgcaggagctgaac
gagaagtatcagcccttcctgcggttcatgaaacggcagatgctgaatgggtaccggcgc
tttgatcccacccgtgggatggagtacatcctggaccttgtattggatgccttcactcaa
aaaggtcatagccagactatcctgaggcgcgtcagcttgttgcgcccactcagcaacatt
gagatcatacctatgccgtatgtgacagaggccacccaggtccatatcattctgcctgtc
accattcgcgagcaggactatgttggaaactttctggatatgtatgtcatgaatgcgctg
gacactcatgacaatgtactgctgacattccttttcatttatgacccctttgatgcccag
agggtgagccagaatgatgtgtttgcagggatcaagtccatgatagctgaagtggagaaa
cgttattctgacatcaagatcccttggatcagtgtgaaaactgaagtcccatcccaggtc
aagctcatggacataatttccaagaagcacccagtggacacccttttctttatttctagc
gtctggacggaggtaaataccgagttcctcaaccgctgccggatgaatgctatcagcaat
tggcaggtctttttccccattcatttccaagagtttaatccttccctggcctaccgtgat
caacaatcgtcgtcttctgaatttctccgggatggtcattttgaccgttatgtctttgag
gaggcttgcttctacaatgccgactacatgactgcccgcaccaaaatggcagctgacatc
ttggacaatgatgagattttggaaagcatggaggtgtacgatgtcttcatcaagtactct
aatctccacatctttagggcagtagagccagcgctggtgcagaagtatgttcaccacgcc
tgcaacccaagactcagtgaggaggtctaccaccgctgcatcttaagcaacctggaaggt
ttagcctctcgctcacatcttggcatggctctctttgagcaggagcaggccaacagcact
taa
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